Pseudomonas sp. Stari2: NH234_24655
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Entry
NH234_24655 CDS
T10554
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00300
Lysine biosynthesis
psdt00550
Peptidoglycan biosynthesis
psdt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NH234_24655
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NH234_24655
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psdt01011
]
NH234_24655
Enzymes [BR:
psdt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NH234_24655
Peptidoglycan biosynthesis and degradation proteins [BR:
psdt01011
]
Precursor biosynthesis
Amino acid ligase
NH234_24655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PipB2_N
Motif
Other DBs
NCBI-ProteinID:
XCX99494
LinkDB
All DBs
Position
complement(5396914..5398377)
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AA seq
487 aa
AA seq
DB search
MSLSLNKIFPHAGHDLLIRELALDSRNVRAGDLFLAVPGGKFDGRSHIADALQRGAAAVA
YEVEGATVLPITEVPLIPVKGLAAQLSDIAGRFYGEPSHHMNLIGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGSGFHGSLQSGLHTTPNPIAMQATLGDLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMEAYAEAKAKLFAWNDLKCRVVNLDDDFGRQ
LAAEKRESRLITYSLLDSSAYLYVREAQFDDHGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLTAL
RPHVKGQLLCLFGCGGDRDRGKRPLMAEVVERLADRVLVTDDNPRTEDPAVIFDDIRAGF
TAVDNVTFVAGRGQAIAQLIASASADDVIVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagtctgaacaagatttttccccacgccggccacgatctgttgatccgtgaa
ctggcgctcgatagtcgcaacgtgcgcgcgggtgacctgttcctcgccgtgccaggcggc
aagttcgacggtcgttcgcacatcgccgacgccttgcagcgcggcgccgctgccgtggct
tatgaagtggaaggcgccaccgtgctgccgatcaccgaagtgccgctgattccggtcaaa
ggcctggcggcgcagctgtcggacatcgccgggcgtttttatggtgagccaagtcatcat
atgaatctgattggcgtcactggcaccaacggcaagaccagcgtgactcagctggtggcg
caggcgctggacctgctcggtcagcattgcggcatcgtcggcaccttgggctccggtttc
cacggctcgctgcaaagcggcctgcacaccacgccgaatccgatcgccatgcaagcgacc
ctgggcgacctgaaaaaggctggcgccaaagccgtggccatggaagtttcgtcccatggt
ctggatcagggccgagtcaccgcactggcgttcgacgtcgcggtgatgaccaacctgtcc
cgcgatcatctcgattaccacggcaccatggaggcctatgcagaagcgaaggccaagctg
tttgcctggaatgacttgaagtgccgcgtggtcaatctggatgacgatttcggccggcaa
ctggccgctgaaaaacgtgagtcgcgtctgatcacctatagcctgctcgacagcagcgcc
tatctgtatgtccgtgaagcgcagttcgacgaccatggcgtgcgtgccacgctggtgacg
ccgcagggcgaacatcatctgcgcagcacgttgctgggccgtttcaacctgagcaacgtc
ctggctgcggtcggcgccttgctcggcctggactacgccctcgacgaaatcctcaaggtg
ctgccaaaactcgaaggcccggccggacgcatgcagcgtctcggcggtggcacccagccg
ctggtggtggtcgattacgcccacaccccggatgcgctggaaaaagttctgaccgctttg
cgcccgcacgtcaaaggtcaactgctgtgcctgttcggctgcggcggtgatcgcgatcgc
ggcaagcgaccgctgatggccgaagtggtcgagcgtctggccgaccgcgtgctggtcacc
gacgacaatccgcgcaccgaagatccggcggtgattttcgatgacatccgcgccggcttc
acggctgtggataacgtcacattcgtggccggtcgcggccaggccatcgcacaactgatc
gccagcgcttcggcggatgacgtgatcgttctggccggcaaaggtcacgaggactatcag
gaaatcaacggcgagcgccacgcattctctgatctggtcgaggccgatcatgccctgacc
gcgtgggaggtggcccatgcttaa
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