Pseudodesulfovibrio sediminis: PSDVSF_06760
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Entry
PSDVSF_06760 CDS
T08380
Name
(GenBank) hypothetical protein
KO
K15022
formate dehydrogenase (NADP+) beta subunit [EC:
1.17.1.10
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00680
Methane metabolism
psef01100
Metabolic pathways
psef01120
Microbial metabolism in diverse environments
psef01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
PSDVSF_06760
Enzymes [BR:
psef01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.10 formate dehydrogenase (NADP+)
PSDVSF_06760
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
Pyr_redox
Pyr_redox_3
NAD_binding_8
FeS
Fer4
DAO
FAD_oxidored
Fer4_9
AlaDh_PNT_C
Fer4_7
NAD_binding_7
Fer4_6
Fer4_21
HI0933_like
FAD_binding_2
FAD_binding_3
Fer4_2
GIDA
FMO-like
MurD-like_N
Amino_oxidase
Fer4_8
Thi4
Motif
Other DBs
NCBI-ProteinID:
BCS87434
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Position
690427..692538
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AA seq
703 aa
AA seq
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MDMITASVLVLFGIGLTAAVILAVASKVLYVYEDPRIAQVESVLAGANCGGCGFPGCAGA
AQGVVDGKAGATVCVIGGDEVAKNVAAIMGLDFSSVEKKIAFVDCTGGTRAEEIYEYQGV
KDCRAQHMLYSGSKMCPEGCLGYGTCVTACQFGAIAMGPDGYPVVDPELCTACGGCEQVC
PRGVITIWGMTARIKHLNENTDCLAPCRQRCPGQINIPRYIEQVSRGDFAGALETIRERI
PMPLSIGRVCPHPCEGVCRRGHVDESVGINMIKRFVADWEMNSGQRLPISCAPENGRRVA
VVGGGPAGLSCAFFLRRLGYSPTIFESMPKLGGQLRYGIPEYRLPKSVLDWEIEGILGLG
VDVVTEQLFGKDFTLDSLAEDGFEAVFLGIGAWMNMTLRIEGEDSIGVETGTEFLTKVGL
GVDTGIGKRVVVIGGGNTAIDTARSSVRLGAHVTMMYRRTRDEMPAHIEEIEGAEEESVK
YLYLAAPNRIIADESGHVTHVEYIQMQLGEPDDSGRRRPVPIEGSESLIECDTVYTSIGQ
KPELSCLYDENGACTLEETRWRTLGADPETLQTAIPNVFTGGDMHTGPALVITALGEGRK
AARSIDQYLTEGVPHVSSNIQRELIPYTMFTDVPDVGYRKRSALPHQIECDERMCTFKEI
EGPLSLEEVKHETCRCLRCGLTCYNRDMVEGQECQAEDCIKNP
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggatatgatcacagcttccgtactcgtcctgttcggcattggcctgaccgcagctgtt
atcctggctgtggcttccaaggtgctctatgtctacgaagatccacgcatcgcccaggtg
gaaagcgtgctcgccggagccaactgcggaggctgcggcttccccggttgcgcaggagcc
gcccagggcgttgtcgatggcaaggccggagccacagtctgcgttatcggaggggatgaa
gtcgccaagaatgtcgctgccatcatgggcctcgatttctcttccgtggagaaaaaaatc
gcctttgtagactgcaccggtggcacccgcgctgaagaaatctatgaatatcaaggcgtc
aaggattgccgcgcccaacacatgctgtacagcggctccaagatgtgccctgagggatgt
ctcggatacggcacctgcgtgacagcctgtcagtttggcgccattgccatggggccagac
ggttaccccgtagtcgacccggaactctgcaccgcatgcggtggatgtgaacaggtctgt
ccacgcggcgtcatcaccatctggggcatgaccgcacggatcaaacatctcaacgagaac
acggactgcctggccccgtgtcggcagcgctgccccggacagatcaatattccccgctat
attgaacaggtttcacgcggtgacttcgccggtgcactggaaaccattcgtgaacgcatt
cccatgcccctgtccatcggacgagtctgccctcacccctgtgaaggcgtctgccgccgc
ggtcatgtcgacgaatctgtcggtatcaacatgatcaaacggtttgtagccgactgggaa
atgaactccggtcaacgtctgcccatctcctgcgccccggaaaatggccgaagagttgcc
gtggtcggtggtggtccggccggactttcctgcgccttcttcctgcgcagactgggatac
agtccgaccatcttcgagtccatgcccaagctcggcggccagctcagatacggcatccct
gaatacaggttgcccaagtcggtactcgactgggagatcgagggcatcctcggactgggg
gttgatgtcgtcacggaacaacttttcggcaaagacttcacactcgactctctggcagaa
gacggcttcgaggcagtcttcctcggcatcggagcatggatgaacatgaccctcaggatc
gaaggcgaagattccatcggcgtggaaaccggcacggaattcctgacaaaggtcggtctc
ggagtcgataccggcataggcaaaagggtcgtggtcatcggtggaggcaacacggccatt
gatacggcccgctccagcgtcagactcggcgcacacgtcaccatgatgtaccggcgcacc
agagacgagatgccggcgcacatagaggaaatagaaggagcggaagaggaaagtgtcaag
tacctgtatctcgccgcccccaaccgtatcatcgcggatgagtccggccatgtaacacac
gtcgaatacatccagatgcaactgggcgaacccgatgactccggccgtcgccgccctgtt
cccattgaaggttcggaatcgctcatagagtgcgatacggtctatacttccataggccaa
aaacccgaactctcatgtctatatgatgaaaacggcgcatgtacactggaagagactcga
tggcgcaccctgggtgccgacccggagaccctgcaaacagccattcccaatgtgttcaca
ggcggcgacatgcacaccgggccggcgctggtaatcactgcgctgggtgaaggtcgaaaa
gcagccagatcaatagatcaatatctgactgaaggcgtgccccatgtctcctcaaacata
cagcgcgaactgattccgtacaccatgtttactgacgtcccggatgtcggctacaggaaa
cgctccgctctaccacatcaaatagaatgtgatgaacggatgtgcacattcaaggaaatt
gaaggcccgttgagcctggaagaagtcaaacatgaaacatgcagatgccttcgttgcggc
ctgacctgctataatagagatatggtggaagggcaggaatgtcaggcagaggattgtatc
aaaaatccctaa
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