KEGG   Pseudodesulfovibrio sediminis: PSDVSF_06760
Entry
PSDVSF_06760      CDS       T08380                                 
Name
(GenBank) hypothetical protein
  KO
K15022  formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
Organism
psef  Pseudodesulfovibrio sediminis
Pathway
psef00680  Methane metabolism
psef01100  Metabolic pathways
psef01120  Microbial metabolism in diverse environments
psef01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:psef00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    PSDVSF_06760
Enzymes [BR:psef01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.10  formate dehydrogenase (NADP+)
     PSDVSF_06760
SSDB
Motif
Pfam: Pyr_redox_2 Fer4_20 Pyr_redox Pyr_redox_3 NAD_binding_8 FeS Fer4 DAO FAD_oxidored Fer4_9 AlaDh_PNT_C Fer4_7 NAD_binding_7 Fer4_6 Fer4_21 HI0933_like FAD_binding_2 FAD_binding_3 Fer4_2 GIDA FMO-like MurD-like_N Amino_oxidase Fer4_8 Thi4
Other DBs
NCBI-ProteinID: BCS87434
LinkDB
Position
690427..692538
AA seq 703 aa
MDMITASVLVLFGIGLTAAVILAVASKVLYVYEDPRIAQVESVLAGANCGGCGFPGCAGA
AQGVVDGKAGATVCVIGGDEVAKNVAAIMGLDFSSVEKKIAFVDCTGGTRAEEIYEYQGV
KDCRAQHMLYSGSKMCPEGCLGYGTCVTACQFGAIAMGPDGYPVVDPELCTACGGCEQVC
PRGVITIWGMTARIKHLNENTDCLAPCRQRCPGQINIPRYIEQVSRGDFAGALETIRERI
PMPLSIGRVCPHPCEGVCRRGHVDESVGINMIKRFVADWEMNSGQRLPISCAPENGRRVA
VVGGGPAGLSCAFFLRRLGYSPTIFESMPKLGGQLRYGIPEYRLPKSVLDWEIEGILGLG
VDVVTEQLFGKDFTLDSLAEDGFEAVFLGIGAWMNMTLRIEGEDSIGVETGTEFLTKVGL
GVDTGIGKRVVVIGGGNTAIDTARSSVRLGAHVTMMYRRTRDEMPAHIEEIEGAEEESVK
YLYLAAPNRIIADESGHVTHVEYIQMQLGEPDDSGRRRPVPIEGSESLIECDTVYTSIGQ
KPELSCLYDENGACTLEETRWRTLGADPETLQTAIPNVFTGGDMHTGPALVITALGEGRK
AARSIDQYLTEGVPHVSSNIQRELIPYTMFTDVPDVGYRKRSALPHQIECDERMCTFKEI
EGPLSLEEVKHETCRCLRCGLTCYNRDMVEGQECQAEDCIKNP
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggatatgatcacagcttccgtactcgtcctgttcggcattggcctgaccgcagctgtt
atcctggctgtggcttccaaggtgctctatgtctacgaagatccacgcatcgcccaggtg
gaaagcgtgctcgccggagccaactgcggaggctgcggcttccccggttgcgcaggagcc
gcccagggcgttgtcgatggcaaggccggagccacagtctgcgttatcggaggggatgaa
gtcgccaagaatgtcgctgccatcatgggcctcgatttctcttccgtggagaaaaaaatc
gcctttgtagactgcaccggtggcacccgcgctgaagaaatctatgaatatcaaggcgtc
aaggattgccgcgcccaacacatgctgtacagcggctccaagatgtgccctgagggatgt
ctcggatacggcacctgcgtgacagcctgtcagtttggcgccattgccatggggccagac
ggttaccccgtagtcgacccggaactctgcaccgcatgcggtggatgtgaacaggtctgt
ccacgcggcgtcatcaccatctggggcatgaccgcacggatcaaacatctcaacgagaac
acggactgcctggccccgtgtcggcagcgctgccccggacagatcaatattccccgctat
attgaacaggtttcacgcggtgacttcgccggtgcactggaaaccattcgtgaacgcatt
cccatgcccctgtccatcggacgagtctgccctcacccctgtgaaggcgtctgccgccgc
ggtcatgtcgacgaatctgtcggtatcaacatgatcaaacggtttgtagccgactgggaa
atgaactccggtcaacgtctgcccatctcctgcgccccggaaaatggccgaagagttgcc
gtggtcggtggtggtccggccggactttcctgcgccttcttcctgcgcagactgggatac
agtccgaccatcttcgagtccatgcccaagctcggcggccagctcagatacggcatccct
gaatacaggttgcccaagtcggtactcgactgggagatcgagggcatcctcggactgggg
gttgatgtcgtcacggaacaacttttcggcaaagacttcacactcgactctctggcagaa
gacggcttcgaggcagtcttcctcggcatcggagcatggatgaacatgaccctcaggatc
gaaggcgaagattccatcggcgtggaaaccggcacggaattcctgacaaaggtcggtctc
ggagtcgataccggcataggcaaaagggtcgtggtcatcggtggaggcaacacggccatt
gatacggcccgctccagcgtcagactcggcgcacacgtcaccatgatgtaccggcgcacc
agagacgagatgccggcgcacatagaggaaatagaaggagcggaagaggaaagtgtcaag
tacctgtatctcgccgcccccaaccgtatcatcgcggatgagtccggccatgtaacacac
gtcgaatacatccagatgcaactgggcgaacccgatgactccggccgtcgccgccctgtt
cccattgaaggttcggaatcgctcatagagtgcgatacggtctatacttccataggccaa
aaacccgaactctcatgtctatatgatgaaaacggcgcatgtacactggaagagactcga
tggcgcaccctgggtgccgacccggagaccctgcaaacagccattcccaatgtgttcaca
ggcggcgacatgcacaccgggccggcgctggtaatcactgcgctgggtgaaggtcgaaaa
gcagccagatcaatagatcaatatctgactgaaggcgtgccccatgtctcctcaaacata
cagcgcgaactgattccgtacaccatgtttactgacgtcccggatgtcggctacaggaaa
cgctccgctctaccacatcaaatagaatgtgatgaacggatgtgcacattcaaggaaatt
gaaggcccgttgagcctggaagaagtcaaacatgaaacatgcagatgccttcgttgcggc
ctgacctgctataatagagatatggtggaagggcaggaatgtcaggcagaggattgtatc
aaaaatccctaa

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