Pseudodesulfovibrio sediminis: PSDVSF_11810
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Entry
PSDVSF_11810 CDS
T08380
Symbol
mexF
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef01501
beta-Lactam resistance
psef01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSDVSF_11810 (mexF)
01503 Cationic antimicrobial peptide (CAMP) resistance
PSDVSF_11810 (mexF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psef02000
]
PSDVSF_11810 (mexF)
01504 Antimicrobial resistance genes [BR:
psef01504
]
PSDVSF_11810 (mexF)
Transporters [BR:
psef02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSDVSF_11810 (mexF)
Antimicrobial resistance genes [BR:
psef01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PSDVSF_11810 (mexF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BCS87939
LinkDB
All DBs
Position
complement(1220781..1223954)
Genome browser
AA seq
1057 aa
AA seq
DB search
MIRFFIDRPIFASVMAIIILLVGGLSIFALPIAQYPEIAPPSVRVSTTYTGADAQTVMES
VATPIEEQVNGAQDMMYMSSISANDGSMNLTVTFELGRDLELATVDVQNRVNLASPQLPQ
EVRNTGVSVRKQSPDIVLIINLTSDNPAYNTLFLNNYAKINLYDALKRIQGVGDVSLFGD
QDYGMRIWLNPDKLTAYGLTVTDVINAVKEQNVQAPAGQIGMPPSPKDQQFQMSLRVKGR
LSEPEEFGNIIVKANEDGSSVKVQDVARVELGAKNYFTFARLNGQDTASILIYQLPGANA
LDVADAVYKTMDELSQSFPEGVKYQIPYNTTLFVSSSIDEVMVTLIEALVLVFLVVFIFL
QNWRTTIIPMVCVPVSLIGTFALFPLLDFSINTLTLFGLVLAIGIVVDDAIVVVEATQRF
IDDEGLSPKEATKAAMKQVTGPVIASTLVLIAVFIPVAFMGGITGQLYKQFALTLSVSVA
ISSINALTLSPALSALLLRPYTPIRGPLGWFFEKFNVTFEWVTKRYNSAVSALVRRAVLG
ILVVLIVVVGCAGLFKILPSGFVPDEDQGYFIVNAMLPEGASLERSNAVAKKVEAYFKDA
EGVRSLVSLGGFSLLTGAYSSYNSAFFVVLDDWSERTTPELTSNAIMAKAQKAFWGIQEA
IVVGFGPPPIRGLSSTGGLQFELQDKTGGSIEELAAVSASFMAEAKKLPEISNVFTTFSA
HVPQYDVSIDREKAKKLGVPVNDVFQTLQTYLGGYYINDFNKYGRTYRVMAQAESQFRTR
IEDLNQFYMRSADNQMVPLSTLSRSDRITGPEYVQRYNIYRTVEITMSPTEGYSSGQAMA
ALEALARKSLPQGYGYDWSGIAYQEKNSGGEAGMIFGLAIIMVFLVLAAQYESWTTPFAV
IFCVPLGIFGAMSSQWIRGLENNVYAQIGLIMLIGLAAKNAIMIVEYAKEKHDEGMDLRE
AAMAAASLRFRPILMTSFAFILGVIPLVWAAGAGSASRHALGTSVFGGMIAATLLGVLVV
PALYTAIQGAGSALGSKLRSGVANPREGDKPDAGGDT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctttttcatagatagacccatttttgcttcggtgatggccatcatcatcctg
ctggtgggtgggttgtccatttttgctctccccattgcccagtatccagagatcgcgccg
ccatcggtccgggtcagcaccacctataccggtgcggatgcacagacggtcatggaatcc
gtggccactcccattgaggagcaggtcaacggcgcgcaggacatgatgtacatgtcttcg
atttcggccaacgacggttccatgaacctgacggtcacctttgagctggggcgtgatctc
gaactggccaccgtggacgtgcagaaccgcgtgaacctggcgtcgccgcagcttccgcag
gaagttaggaacaccggtgtcagcgttcgcaaacagtcgcccgatatcgtcctgatcatc
aacctgacctcggataatcccgcttacaatacgctgtttctcaacaactacgcaaagatc
aatctctatgatgcgctcaaacgtattcagggcgtcggcgacgtctccctgttcggcgat
caggattatggtatgcgcatttggttgaatccggataagctgactgcgtacggcttgacc
gtgactgatgtcatcaacgccgtgaaagaacaaaacgttcaggctccggccggacagatc
ggcatgcctccgtcccccaaggatcagcaattccagatgtccctgcgagtcaaagggcgt
ctgtcggaaccggaggaatttggcaatataatcgtcaaggccaacgaagacggcagctct
gtcaaggtgcaggatgtggcccgtgtggaattgggggccaagaactatttcacctttgcc
cgactgaacggccaggataccgcgtccattctcatttatcagttgccgggtgcaaacgct
ctggacgtggctgatgccgtgtacaagaccatggacgaattgtcgcagtccttccctgaa
ggtgtcaaatatcaaatcccctacaacacaacgttgtttgtcagttcctctattgacgag
gttatggtcactctgatcgaggcattggttctcgtctttttagtggtcttcatctttttg
cagaactggcgcacgaccatcattcccatggtctgtgtaccggtttcgctgattggtacg
tttgcgcttttcccgttgctcgacttctccatcaacaccctgactcttttcggactggtg
ttggctatcggcatcgtggtcgatgacgccattgttgtggtcgaggccacccagcgcttc
atcgatgacgagggactttcgcccaaagaggcgaccaaagccgccatgaaacaggtcacc
ggtccggtcatcgccagtacgctggtgcttatcgccgtgttcattcctgttgcgtttatg
ggcggtattaccggtcagttgtacaagcagttcgcgctgacgctgtccgtgtccgtggcc
atctcgtcgatcaacgctctgacattgtctccggcattgtcagccctgttgctcagaccg
tacacacccatccgtggaccgcttggctggttctttgagaagttcaacgtgacctttgaa
tgggtaacgaagcgatacaatagtgccgtgagcgcactggttcgtcgggctgtcttgggc
attctcgtggtgctcattgtggttgtggggtgtgcggggctgttcaagatcctgccgtcc
ggctttgtgcctgatgaggatcagggctacttcatcgtcaatgccatgctccctgagggc
gcgtcgcttgagcgttccaacgcagtggccaaaaaggtcgaggcgtacttcaaggatgcc
gaaggcgttcggagcttggtcagcctcggcgggtttagtctgctcaccggtgcatattcc
tcatataactccgcattcttcgtggttctggacgactggtccgagcggaccacgcccgag
ttgacgtcaaacgccataatggccaaggcacagaaagctttctggggtattcaggaagcc
attgtcgtgggctttggtccgccgcccatccgtggcctgagttccacaggcggccttcag
tttgagttgcaggacaagaccggcggctccattgaggagttggcagcagtgtccgcttcc
ttcatggccgaggccaagaaattgcctgaaatcagtaatgtgtttaccaccttttccgcg
catgttcctcagtatgatgtgagcattgaccgcgaaaaggccaagaagctcggtgtgccg
gtcaacgacgtcttccagacgttgcagacctatctgggcggctattatatcaatgacttc
aacaagtacgggcgtacctatcgcgtcatggctcaggccgagtcccagttccgcacgcgc
atcgaagacctgaaccagttctacatgcgttcggcagacaatcagatggtgcctttgtcc
acactgagtcgttccgaccggattaccgggccggaatatgtccagcggtataatatctac
cgcacagtcgagataaccatgtcgccgacggaagggtacagctccggtcaggccatggcc
gcgctggaagctctggctcgcaagagcctgccccaggggtatggctatgactggtcaggt
atcgcctatcaggagaagaactccggtggtgaagccgggatgatcttcgggctcgccatc
atcatggtcttcctggttctagcagcgcagtatgagagctggaccacaccgttcgcggtt
atcttctgtgtgccgcttggtatctttggtgccatgtcctcgcagtggatacgcgggctg
gagaacaacgtctatgcgcagatcgggttgatcatgctcatcggtctggcggccaaaaac
gccattatgatcgttgaatatgccaaggaaaagcatgacgaaggcatggacttgcgggaa
gcggccatggcagccgccagtctgcgtttccggccgattctgatgacctcgttcgccttt
atcctcggtgttatcccgctggtatgggcagccggggccggttcggccagccgccatgct
ctgggcacttcggtgttcggtggcatgatcgcggcaaccctgctcggcgtgctggtggta
ccggcgttgtataccgccattcaaggcgctggttcggcgcttggctcgaagttgcggagt
ggagtggccaacccgagagagggtgacaagccggacgccggaggcgatacgtag
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