KEGG   Pseudodesulfovibrio sediminis: PSDVSF_20610
Entry
PSDVSF_20610      CDS       T08380                                 
Name
(GenBank) vitamin B12-dependent methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
psef  Pseudodesulfovibrio sediminis
Pathway
psef00270  Cysteine and methionine metabolism
psef00450  Selenocompound metabolism
psef00670  One carbon pool by folate
psef01100  Metabolic pathways
psef01110  Biosynthesis of secondary metabolites
psef01230  Biosynthesis of amino acids
psef04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:psef00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    PSDVSF_20610
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    PSDVSF_20610
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PSDVSF_20610
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    PSDVSF_20610
   04980 Cobalamin transport and metabolism
    PSDVSF_20610
Enzymes [BR:psef01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     PSDVSF_20610
SSDB
Motif
Pfam: S-methyl_trans B12-binding Pterin_bind B12-binding_2
Other DBs
NCBI-ProteinID: BCS88819
LinkDB
Position
complement(2153663..2156071)
AA seq 802 aa
MPDFRSLLDDDKIYYFDGGYGTLLQGRGLPAGLSPELWGLRAPEVIQAVHQDYLDAGANI
LTTNTFGGSRPKLGLDADPYELNKAMTRIARKVAGDSAFVAASIGPTGHFVEPLGDLTFR
ELVDIFKEQIQGCVDGGADLILGETHFDLAEAKAVVIAARMVCDLPVAMSMTFEGEASLT
GTSPQTFVDTMQNMGVELIGTNCSAGPEQMHNTLKAWAPRLETPTFAEANAGLPELDDEG
NTAFRLSPDAFAEQASGFVALGAKFIGGCCGTTPDHIRALRAKVGNASWVRPQKTDNAQM
VLTSRAVSVPIGFDHPGVIIGERINPTGKKQLIAELQEGVFTEAQRFATEQIELGAPVLD
VNVGAPMVDEVALLPELVTSLVGRFTTPLSIDSNDMKAVEAALWAYPGSPLVNSISGEPG
KMETLGPLCKLFGAPFILLPIVGNKLPVTAKERLNVIADLLAQADAFGIPRRLIMVDALA
LTVSSKPEAALHSLEVMRHCREKWQLPTTIGLSNISFGLPARELLNSTFLALSMSAGLCS
FISNPNSSRIQESLHTTEVLLNRDKQAERYIDRFTDWTQAEPTQSKGSTKGDVAEDLPVV
QVAVIKGNKDGIVSLVEAELEGGMSAMEIVNSLLIPGILVVGEKYEKKEYFLPQLLQSAE
TMQTAFARLKPLLEEGGAAEDKPVVIMATVEGDIHDIGKNIVCLMLKNYGFDVVDLGKDV
PAEKIVDAAEESKAALIGLSALMTTTMVRMEDTVRLVNERGLKAKVIIGGAVVTEKFCNA
IGADGWSTDAVAAVKLAQQLTR
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgcccgacttcagatcactgcttgacgacgacaaaatctattattttgatggtggttac
ggcaccttgctgcaaggtcgcggactgcccgcaggcctttcgcccgagctgtgggggctc
agggctcccgaggtcatccaggctgtgcatcaggactatctcgatgccggagccaacatc
ctgaccaccaacacctttggcggttccaggcccaagctggggctggacgccgacccctat
gaattgaacaaggccatgacccgaatcgcccgcaaggttgccggagattccgcgttcgtg
gccgcatccatcggacctaccgggcattttgtcgagccgcttggcgacctgactttccgt
gagttggtggatattttcaaggagcagatccagggctgcgtggacggcggcgctgacctc
atccttggagagacgcatttcgatctggccgaggccaaggccgtggttatcgcggcccgc
atggtgtgtgacctgcccgtggccatgtccatgaccttcgagggtgaggcgtccctgacc
ggcacctcgccgcagacctttgtggacaccatgcagaacatgggcgtcgagcttatcggc
accaactgctctgccggtcccgagcagatgcacaacacgctcaaggcatgggctccccgt
ctggagaccccgacttttgccgaggccaacgccggtctgcccgagctggacgatgagggt
aataccgcctttcgtctgtcgcccgacgcctttgccgagcaggccagcggatttgtggct
ctgggcgccaagttcatcggcggctgctgcggcaccacgccggatcatatccgtgcgctg
cgcgccaaggtgggcaacgccagctgggtgcggcctcagaagaccgacaacgcccagatg
gtcctgacttccagagcggtttccgtgcccatcggtttcgatcaccccggcgtgatcatc
ggcgagcgcatcaatcccacgggtaagaagcagctcatcgccgagttgcaggaaggcgtg
ttcaccgaagcccagcgattcgccacggagcagatcgagctgggagcgcccgtgctggac
gtcaacgtgggagcgcccatggtggacgaggttgcgctgctgcccgaactggtgacctct
ctggtcggccggtttacaactcccttgtccattgattcaaatgacatgaaggctgttgag
gccgcgctctgggcctatccggggtcgccgctggtcaactccatttccggtgaacccggc
aagatggaaacactcggtcccctgtgcaaactctttggcgctccgttcattctgttgccc
atcgtgggcaacaagctgcctgtcacggccaaggaacggctcaatgtcatcgccgacctg
ctggcgcaggccgatgcgttcggcatcccgcgccgactgatcatggtggatgccctggcc
ctgaccgtgtcctccaagcccgaggccgcactgcattccctggaagtgatgcgccactgc
cgtgaaaagtggcagttgcccaccaccatcgggttgtccaatatctctttcggcctgcct
gcccgcgagttgctgaactccaccttcctggcgctgtccatgagcgcagggctgtgttcg
ttcatttccaaccccaactcgtcgcgcattcaggagagcctgcatacgactgaggtcctg
ctcaatcgggacaaacaggcagagcggtacattgatagattcaccgactggacccaggcc
gagccgacccagtcaaagggctcgaccaaaggcgatgtggcagaggacctgcccgtggtt
caggtcgctgtcatcaagggaaacaaggacggtatcgtctctctggtcgaagctgagctt
gaaggcggcatgtcggccatggagatcgtcaactcgctgctcattccgggtatcctcgtg
gtgggcgaaaagtatgagaagaaggagtacttccttccgcagctcctgcagagcgccgag
accatgcagaccgcctttgcccgactcaagccgctccttgaagagggcggagctgccgag
gacaaaccggtcgtcatcatggccacggtcgaaggcgatattcatgatatcggcaagaat
attgtctgtctgatgctcaagaactacggatttgacgtggtcgatctcggcaaggacgtg
ccggccgaaaagattgttgacgcggctgaagaatccaaggcagccctgatcggcctgtcc
gccctcatgaccaccaccatggtgcgcatggaagacacggtgaggctggtcaatgaacgc
ggcctgaaggccaaggtcatcattggcggggccgtagtcaccgaaaagttctgcaacgcc
atcggcgctgacggctggtccacggatgccgtggccgcagtcaagctggcgcaacagttg
acccgataa

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