Pseudodesulfovibrio sediminis: PSDVSF_23870
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Entry
PSDVSF_23870 CDS
T08380
Symbol
cdd
Name
(GenBank) cytidine deaminase
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00240
Pyrimidine metabolism
psef01100
Metabolic pathways
psef01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PSDVSF_23870 (cdd)
Enzymes [BR:
psef01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
PSDVSF_23870 (cdd)
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Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
dCMP_cyt_deam_2
MafB19-deam
Motif
Other DBs
NCBI-ProteinID:
BCS89145
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All DBs
Position
2498520..2498924
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AA seq
134 aa
AA seq
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MIDIQELIRLATEARNTAHVPYSNHPVGAAIVTDSGNIFTGCNVENAAYPLGSCAEQSAI
SAMVRGGEKTISVIVVVGPTLEPCTPCGGCRQRIREFSTPQTIIHACNEQEVLLTMTMDE
LLPQSFGPENLKKI
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgattgatatacaggaactcatacgcttggccaccgaggcgcgaaacacggcccatgtg
ccgtactccaatcatccggtgggcgcggccatcgtcacggacagcggcaacatctttacc
gggtgcaatgtggaaaacgcggcgtatccccttggcagttgtgcggaacagtcggccatc
tccgccatggtgcgcgggggcgaaaagaccatctccgtcattgtggtggtcggccctacc
cttgagccgtgtactccgtgcggcggatgccgtcagcgcattcgcgagttcagcaccccg
cagacgatcatccacgcctgtaatgagcaggaagtgcttttgaccatgaccatggacgaa
ctgctgccccagtcgttcggccctgaaaacctgaaaaaaatatag
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