Pseudodesulfovibrio sediminis: PSDVSF_26180
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Entry
PSDVSF_26180 CDS
T08380
Symbol
ispDF
Name
(GenBank) bifunctional enzyme IspD/IspF
KO
K12506
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
2.7.7.60
4.6.1.12
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00900
Terpenoid backbone biosynthesis
psef01100
Metabolic pathways
psef01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PSDVSF_26180 (ispDF)
Enzymes [BR:
psef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.60 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PSDVSF_26180 (ispDF)
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
PSDVSF_26180 (ispDF)
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Motif
Pfam:
YgbB
IspD
NTP_transf_3
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
BCS89376
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Position
complement(2748393..2749589)
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AA seq
398 aa
AA seq
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MDRPLKHIWGIILAAGSGTRIAEATQGTRKQYLEYKSAPLFWHCARTFSRVAAMQGVVFV
FPPDDVKAMEKQVRTYFKSENLGVKWAVTAGGERRQDSVRNGLEALPDTCEAVLVHDAAR
PFVSGRVLTDLIETLQSGARGVIPAIPVTDTVKRVDNDTVTETLNRSELAAVQTPQAFET
ALLKEAHERAAKEGWTVTDDASMVERIAEVVTIPGESANIKITVPEDLKRLEQTKTPVPC
VGWGYDVHRFGGENDRPFTLGGVPIAGGPTIVAHSDGDVLLHALTDAILGTFGGGDIGTH
FPDTDPKYKGADSSVLLREVLFLANEAGAAIKHVDMTVMTQVPKLTPHAAQIAKNVCRLL
GLEPHQVNFKATTEEKLGFTGQKKGIKAVATVTALREL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggacagaccgctgaaacatatctggggaatcatcctcgccgcaggctccggcacccgc
atcgccgaagccacccagggtacgcgcaagcagtatctggaatacaagtcagcgcccctt
ttctggcattgcgcccgcacgttttcgcgggtggccgccatgcagggagtcgtgttcgtc
ttcccgcccgacgatgtcaaagccatggaaaagcaggtccgcacctatttcaaatccgag
aacctcggcgtgaaatgggcggtgaccgcagggggcgagcggcgacaggattccgtgcgc
aacggcctggaagccctgcccgacacctgcgaagccgtactcgtccacgacgcggcccgt
ccttttgtttcgggccgtgtcctcaccgacctcatcgaaacgctgcaatccggcgcacgc
ggggtcatccccgccattccggtgactgataccgtcaaacgggtggacaacgacacggtc
accgagaccttgaaccgatctgaactggctgcggtccagacaccgcaggcctttgagacg
gccctgctcaaggaagcccatgagcgcgctgccaaagaaggctggaccgtcacggacgac
gcctccatggtggaacggattgccgaggtcgtcaccattcccggtgaatccgccaatatc
aaaatcaccgtcccagaagacctgaaacgccttgagcagaccaagacaccggttccctgc
gtgggctggggatacgacgtgcatcgctttggcggcgaaaacgaccgccccttcaccctc
ggcggcgttcccattgccggcgggccgaccatcgtggcccattcagacggcgatgtgctg
ctgcatgccctgacagatgccatcctcggcacctttggcggcggcgacatcggcacgcat
ttccctgacaccgaccccaaatacaagggagcggacagctccgtgctgttacgtgaagtg
ctcttcctggccaatgaagccggagcagccatcaagcatgtggacatgaccgtgatgaca
caggttcccaagctcaccccccatgccgcacagatcgccaaaaacgtctgtagactcctc
ggcctggaaccgcatcaggtcaacttcaaggccaccaccgaggagaagctcggtttcacg
gggcaaaagaaaggcatcaaggccgtggccaccgtcactgccctgagggagttgtag
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