Pseudodesulfovibrio sediminis: PSDVSF_28760
Help
Entry
PSDVSF_28760 CDS
T08380
Symbol
cobDQ
Name
(GenBank) adenosylcobalamin biosynthesis bifunctional protein CobDQ
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00860
Porphyrin metabolism
psef01100
Metabolic pathways
psef01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSDVSF_28760 (cobDQ)
Enzymes [BR:
psef01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
PSDVSF_28760 (cobDQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_3
Aminotran_1_2
CbiA
AAA_26
SNO
GATase
Motif
Other DBs
NCBI-ProteinID:
BCS89634
LinkDB
All DBs
Position
3054049..3056730
Genome browser
AA seq
893 aa
AA seq
DB search
MVKQTLFAGIPDVLDEQKYAHGGNVRRLAETAGCLPEEILDFSANVNPLGPPPWLGQVVG
QALQSVDAYPDPDCYDLLMAASELYKVWPTQVIAGNGASELLFAIAGMGQHRQAIIPSPT
YVDYARACKAHRLPIVEAGMTEDFQVDFPAMASLLTTPSVVFLCNPNNPTGTTISPADLR
EVATMFPQSRFVVDESFGEFMPEDTDRLIRNRPSNVITVLSLTKFYAIPGIRLGLAFGDP
DVILRLKQRLPAWSVNLLAQKVGERCLRDKQYAAVTREETGLLRENLASGLRHIPGIKVM
PGVANYLLCRMDRIGQDATGLQQRLLKEHHISIRLCGNYTGLDNNWFRVAVRDKDDNEQL
IRAMEAVSGTARGPVVKRARKTPALMIQGTSSNAGKSVLAAAFCRIMLQDGYSVAPFKAQ
NMSLNSFVTDQGGEMGRAQVTQAMACRLKPDVRMNPVLLKPGSDTGSQVIVMGQPVGHMA
VREYVEYKPRAWEAVKTAYDSLANEHDIIVLEGAGSPAEVNLKHHDIVNMAMARFANARV
LLTGDIDRGGVFASMVGTMHLLTPMERDLVEGFLINRFRGDASLLDPAFGQMFEHTGKPV
MGTIPYIHSLGLPEEDSVSFKEGFRPEHTSFPDDECVEIVVLDLPRISNFNDIDPLHAEP
DVKIRVVSDARDVGTPDAIIIPGSKSTVPDMKTLKGTGMAAVLRELANDGHRTRIVGICG
GFQMLGQTVDDPYGLESETTRVEGFGLLPVQTSLLPDKTLTRTWGVHSGSGHPVHGYEIH
HGQTTPLADDLRVALRDNAGEPLGYMRADGRVVGSYLHGLFDADEFRRWFINQLRMDKGL
SPLDGVQVTFDLEDALDNLASVVREAVCMDKVYKALGFSGCCNQASLFYRMGG
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacagactctatttgcggggattcccgatgttctggatgagcagaaatatgct
catgggggaaacgtgcggcgactggccgaaactgccggatgcctgcccgaggagattctt
gatttttctgccaacgtgaatccgcttggtccgccgccgtggctgggacaggtggttggg
caggcgttgcaatccgtggatgcctacccggacccggactgttatgatctgctcatggcc
gcgtcggaattgtacaaggtctggccgacacaggtcatcgccggcaacggcgcgtccgag
ctgctttttgccatcgcgggcatgggccagcatcgacaggcgatcatcccttcgcccacc
tatgttgattatgcacgggcatgcaaggcgcatcgactgcccattgtcgaagcgggcatg
accgaggactttcaggtggatttcccggccatggcctcgttgttgaccaccccatcggtg
gtctttctgtgcaatccgaacaaccccacggggacgaccatttctccggccgacctgagg
gaagtggcgaccatgtttccgcagtcgcggttcgtggtggatgaatcctttggcgagttc
atgcccgaggacacggaccggctgatccgtaatcgcccctccaatgtgatcaccgtcttg
tcgctgaccaaattttacgccatccccggtattcggttggggctggcttttggcgacccg
gatgtgatcctgcgactcaagcagcggctcccggcctggtccgtgaacctccttgcccag
aaagtgggcgagcggtgtcttcgggacaagcagtatgctgccgtcacccgtgaagagacc
gggttgttacgcgagaaccttgcctcgggcctgcggcatattccgggtatcaaggtcatg
cccggcgtggccaactacctgctctgtcgcatggaccgtatcggtcaggacgccaccggg
cttcagcagcgtctgctgaaggagcaccatatctccatccgcctgtgcggtaactatacc
ggactggacaacaactggttccgtgtggccgtgcgtgacaaggatgacaacgagcagctc
atccgggccatggaagcggtcagcgggaccgcgcgcggaccggttgtgaaacgcgcgagg
aaaactcccgcgctcatgatccagggaaccagctccaatgcgggcaaatccgttttggcc
gcagcgttctgccggatcatgcttcaggacgggtactccgtggcgccgttcaaggcgcag
aacatgtcgctcaattcgtttgtcacggatcagggcggcgagatgggacgcgcgcaggtg
acccaggccatggcctgtcgcctcaaaccggatgtgcgcatgaacccggtactgctcaag
cccggctcggataccggctctcaggtcattgtcatggggcagcctgtggggcacatggcc
gtgcgggaatatgtggagtacaagccgcgcgcctgggaggccgttaaaaccgcctacgac
tcactggccaacgagcatgacattatcgtgctggaaggcgctggcagtccggcggaagtg
aatctgaaacaccacgacatcgtgaacatggccatggccagattcgccaacgcgcgcgtg
ctgcttacgggcgacatcgaccggggcggcgtgttcgcgtccatggtcgggaccatgcac
ctgctcacgcccatggagcgcgatctggtggagggtttcctcatcaatcggttccggggt
gatgccagcctccttgatccagcctttggacagatgttcgagcacacgggcaagccggtc
atgggcaccatcccgtacatccattccctcggcctgcccgaagaggattcggtctccttc
aaggaaggattcaggccggagcatacctccttcccggacgacgagtgtgtggagatcgtg
gtgctggatctgccgcgtatctcgaatttcaacgatattgatccgctgcacgccgagccg
gatgtgaagatccgtgtggtttccgatgcgcgtgacgtgggcacaccggacgccatcatc
attcccggctccaagtccacggtgccggacatgaagactctcaaagggacgggcatggcc
gcagtgttgcgggaactcgccaatgacgggcaccgtacccgtattgtcggtatctgcggt
ggttttcagatgctcggccagaccgtggatgatccgtatgggctggagtcggagaccacc
cgcgtggaaggcttcggcctgctgccggtgcagacgtcgctcctgccggacaagaccctg
acccgaacctggggtgtccattcagggtccggccatcctgtgcacggctatgaaattcac
catggacagacaacgccgctggcagacgacctgcgtgtggcgttgcgtgacaacgcaggg
gagccgttgggttatatgcgtgccgatggccgcgtggtcggttcgtatctgcacggcctg
tttgatgcggacgagttccggcgttggttcatcaaccagctgcgcatggacaaggggctg
tcgcctctggatggcgtacaggtcacgtttgatctggaggacgcgctggataacctggcc
tctgtggtgcgggaagccgtgtgcatggacaaggtctacaaggcgctcggtttttccggc
tgctgcaatcaggctagcctgttctaccggatgggcggctga
DBGET
integrated database retrieval system
