Pseudomonas sediminis: HNQ25_11220
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Entry
HNQ25_11220 CDS
T07154
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psej
Pseudomonas sediminis
Pathway
psej01501
beta-Lactam resistance
psej01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HNQ25_11220
01503 Cationic antimicrobial peptide (CAMP) resistance
HNQ25_11220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psej02000
]
HNQ25_11220
01504 Antimicrobial resistance genes [BR:
psej01504
]
HNQ25_11220
Transporters [BR:
psej02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HNQ25_11220
Antimicrobial resistance genes [BR:
psej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HNQ25_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QNH03262
LinkDB
All DBs
Position
2399311..2402379
Genome browser
AA seq
1022 aa
AA seq
DB search
MTLSDVCIRRPVFATVLSLIVVLLGLMAYDRLNVREYPNIDVPIVTVQVTYPGASPEIME
SQVAQPVEDVLSGIEGLDFVTSISRAENTQITAQFRLGRSADEAANDVRDRLGRVRNLLP
DEVDEPIVQKVEADAQPVVWIAFHSQQHSAMEITDLLERVVKDRLQTIPGVSEVQVRGAR
TFSMRIWLDPEKLAAHNLTVQDVEDALRRQNVEIPAGRIESREREFSVLSETDLRTPEQF
SELILDDSQGYLLRLSDVGRAEVGPRDERTVVRFNGLPAVTLGLVKQATANPLDISDGLE
AAWDDVQALLPDGMNMTVANDNSQFIRESIDNVFTTIWEAVVLVILIIFIFLRSLRATLI
PLVTIPVSLIGAFALMSLMGFTINTLTLLAMVLAIGLVVDDAIVMLENIHRHIEAGMKPM
QAAFKGSREIAFAVIAMTLTLAAVFAPIGFMQGTTGKLFTEFAWTLAGAVLVSGFVALTL
TPMMCAVMLKPHQHEQRHGRVYNLIEGFLNGLTYSYKHSLDRALHAWPLVLGVLLGAFVM
CAWLFGGLRSELAPTEDTGTIVGVFNGPDGATIDYTARYGREVEAAYASIPETNRYLMIA
GFPTVAQGISFMKLEDWGDRSRTQFEIRNELLPQLQDIAGMRVTPVNRPPLGQSARNQPI
NFVVRSSMEYAELQMYVDQLMERMRDYPGLEGLDSDLKLNSPQLKITVNREQATAVGTDV
SVIGRSLESLFGSRQVTRFKQNGEQYDVMVQLQDIDRSNPQDLDRVYVRDRDGGMVQLSN
LIEVRETVAPRELNHFNQLRAVTISANVGTGYTLGEALNHLEVAAREVFPPETQYDYTGT
SRDFKESSSGILLIFALALAFIFLVLAAQFESFSDPLIILFSVPLSMAGALLALKLFGGT
WNIYSQIGLVTLIGLITKHGILIVEFANHLLREGKALREAVIEASVQRLRPILMTTGAMV
LGSLPLAIATGAGAESRQQIGLVIVGGLLVGTFFTLYVIPTLYLLLRRWAPLRVIEEEPA
AV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
gtgacactttccgatgtctgcattcgccggccggtattcgccactgttctgtcgctgatc
gtggtgctgctggggctgatggcctacgaccgcctcaacgtgcgcgagtaccccaatatc
gacgtgcccatcgtcactgtgcaggtcacctatcccggcgccagcccggaaatcatggag
tcgcaggtggcgcagccggtggaggacgtgctctccggtatcgagggcctggacttcgtt
acctccatcagtcgcgcggaaaacacccagatcaccgcacagtttcgcctcggccgcagc
gcagacgaggccgccaacgacgtacgggaccgtctcggtcgggtgcgcaacctgctgccg
gacgaagtggacgagcccatcgtgcagaaggtcgaggccgatgctcagccggtggtgtgg
atcgcttttcacagccagcagcacagcgccatggagatcaccgatctgctggagcgggta
gtcaaggatcgcctgcagaccattcccggtgtgtccgaagtgcaggtgcgcggggcgcgt
accttctccatgcgcatctggctcgacccggaaaagctcgccgcgcacaacctcaccgtg
caggacgtggaagacgccctgcgtcggcagaacgtggagattccggccgggcgcatcgag
tcacgcgagcgtgagttcagcgtgctctcggaaaccgatctgcgtaccccggagcagttc
agcgagctgattctcgacgattcgcaaggctatctgctgcgtctgtccgatgttggccgc
gccgaggtggggcctcgcgacgagcgcaccgtggtgcgtttcaacggtttgccagcggtg
accctgggcctggtcaagcaagccacggccaacccgctggatatctccgatggcctcgaa
gcggcctgggatgacgttcaggcattgctgcccgacggcatgaacatgaccgtggccaac
gacaactcgcagttcatccgcgagtccatcgataacgtctttaccaccatctgggaagcc
gtggtgctggtcatcctcatcatcttcatcttcctgcgctcgctgcgtgcgacgctgatt
ccgctggtgaccatcccggtctcgttgatcggcgccttcgccctgatgtcgctgatgggc
ttcaccatcaacaccctgaccttgctggcgatggtgttggccatcggcctggtggtggat
gacgccatcgtcatgctggagaacatccatcgccatatcgaggctgggatgaagccgatg
caggcagccttcaagggtagccgcgagatcgcctttgcggtgatcgccatgaccctgacc
ctggctgcggtattcgccccaatcggcttcatgcagggcaccaccggcaagctgtttacc
gagttcgcctggaccttggccggcgccgttctggtttccggtttcgtggcactgacgctg
acgccgatgatgtgcgcggtgatgctcaaaccgcatcagcacgagcagcgccatggccgc
gtgtataacctgatcgaaggcttcctcaacggcctgacctatagctacaaacacagcctg
gaccgtgcgctgcatgcctggccgctggtgcttggcgtgctgctcggtgccttcgtgatg
tgcgcctggctgttcggcggcttgcgttcggagctggcgcctaccgaggacaccggcacc
atcgtcggcgttttcaatggcccggacggcgccaccatcgattacacggcgcgctacggc
cgtgaggtcgaagccgcttatgcgagcattccggagaccaatcgctatctgatgatcgct
ggtttccccacggtggcgcagggcatctccttcatgaaactggaggactggggcgaccgc
tcgcgtacccagttcgagattcgcaatgaactgctgccgcagttgcaggacattgccggt
atgcgcgtgaccccagtcaaccgcccgccgctggggcagagcgcgcgcaaccagccgatc
aacttcgtcgtgcgctcgtccatggaatacgccgagttgcagatgtatgtcgatcaactg
atggaacgcatgcgtgattatccgggcctggaaggactggatagcgacctcaaactcaat
tcgccgcagctcaagatcactgtcaatcgtgagcaggcaacggcggttggcaccgatgta
tcggtgatcggccgcagcctggaaagcctgtttggcagccgccaggtgacccgcttcaag
cagaacggcgagcagtacgacgtcatggtgcagctgcaggatatcgaccgcagcaacccg
caggacctggatcgggtgtacgtgcgtgatcgcgatggcggcatggtgcagctgtccaac
ctgatcgaggtgcgcgaaacggtggcgccgcgtgagctcaatcacttcaaccagctacgt
gcggtgaccatcagcgccaacgtcggtaccggatacaccctgggcgaggcgctcaatcat
ctggaagtcgccgcccgtgaggtatttccgcctgagacgcagtacgactacaccggcact
tcgcgtgatttcaaggaatccagctcgggcatcctgctgatcttcgccctggccctggcc
ttcatcttcttggtattggccgcgcagttcgagagcttcagcgacccactgatcattctg
ttcagcgtgcccctgtcgatggccggtgccttgctggcgttgaagctgttcggcggcacc
tggaacatctactcgcagatcggcctggtgactctgatcggcctgatcaccaagcacggc
atccttatcgtcgagttcgccaaccacctgctgcgcgagggcaaggcgctacgtgaggcg
gtgatcgaggcgtcggtgcagcgcctgcggccgatcctgatgaccaccggcgccatggtg
ctgggttcgctgccgttggccatcgccacgggtgccggtgccgaaagccgtcagcagatc
ggtctggtgatcgtcggcgggttgctggtgggcaccttcttcaccctttacgtgattccg
acgctgtacctgctgctgcgccgttgggcaccgctgagggtaatcgaggaggagccggca
gcggtctga
DBGET
integrated database retrieval system
