Pseudomonas sediminis: HNQ25_13160
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Entry
HNQ25_13160 CDS
T07154
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00270
Cysteine and methionine metabolism
psej00450
Selenocompound metabolism
psej00670
One carbon pool by folate
psej01100
Metabolic pathways
psej01110
Biosynthesis of secondary metabolites
psej01230
Biosynthesis of amino acids
psej04980
Cobalamin transport and metabolism
psej04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HNQ25_13160 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HNQ25_13160 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HNQ25_13160 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HNQ25_13160 (metH)
04980 Cobalamin transport and metabolism
HNQ25_13160 (metH)
Enzymes [BR:
psej01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
HNQ25_13160 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
Motif
Other DBs
NCBI-ProteinID:
QNG99265
UniProt:
A0ABX6SCV7
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All DBs
Position
2817429..2821139
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AA seq
1236 aa
AA seq
DB search
MSDRSARLQALQQALKERILILDGGMGTMIQSYKLEEADYRGERFADWPSDVKGNNDLLL
LSQPQIIAAIEKAYLDAGADILETNTFNATQVSQADYGMESLAYELNLAGARVAREVADA
KTLETPDRPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVENYTEATRGLIAGGADL
ILIETIFDTLNAKAAIFAVQQVFDEDAVELPIMISGTITDASGRTLSGQTTEAFWNSVRH
ANPISVGLNCALGAKDLRPYLEELSNKADTHVSAHPNAGLPNAFGEYDESPVEMAAVVEE
FAASGFLNIIGGCCGTTPAHIQAIAEAVAKYQPRAIPEIPKACRLSGLEPFTIDRKSLFV
NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSKAAMVRFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHAKLCKRYG
AAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFIEACAFIRDNLPYALSSGGVSNVSFSFRGNNPVREAIHSVFLYYAIQNGLTMGIV
NAGQLEIYDEIPKELRDRVEDVVLNRTPGGTDALLAIADNYRGGGATKEVENEEWRSLPV
DKRLEHALVKGITAFIVEDTEECRQQCARPIEVIEGPLMSGMNVVGDLFGSGKMFLPQVV
KSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQAAIAEKCDIIGLSGLITPSLDEMVHVAKEMQRQGFTLPLMIGGATTS
KAHTAVKIDPQYSNDAVVYVTDASRAVGVATQLLSKELKADFVQKTRDEYVVVRERTAAR
ATRTERLSYDNAVANKPTFDWSGYSAPKPSFTGIKVLDDIDLNVLAEYIDWTPFFISWDL
AGKYPRILTDEVVGEAATTLFADAQELLKKLIDEKLIKARAVLGFWPANQVRDDDIEVYG
DNGEQLATLHHLRQQTIKPDGKPNLSLADFVAPKSSGVTDYVGGFITTAGIGAEEVAKAY
EAKGDDYNAIMVKALADRLAEACAEWLHERVRKEHWGYQPDEHLSNDELIKEAYKGIRPA
PGYPACPDHTEKGTLFKLLDPEADYNKAGRSGVFLTEHYAMFPAAAVSGWYFAHPEAQYF
AVGKVDKDQIESYSERKAQDISVSERWLMPNLGYDD
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgcagcgcccgcctccaagccctccagcaagccctgaaggagcgcatcctg
atcctcgacggcggcatgggcaccatgatccagagctacaagctggaagaggccgactac
cgtggcgagcgcttcgctgactggccgagcgacgtcaaaggcaacaacgacctgctgctg
ctcagtcagccgcagatcattgccgccatcgagaaggcttatctggatgccggcgccgac
attctggaaaccaataccttcaacgccacccaggtatcccaggccgattacggcatggag
tcgttggcctatgagctgaacctggccggtgcccgcgtggcccgtgaagtggccgacgcc
aagaccctggaaaccccggatcgcccacgcttcgtcgcaggcgttttaggcccgaccagc
cgtacctgctcgatctccccggacgtcaacgaccccggctaccgcaacgtcaccttcgat
gaactggtggaaaactacaccgaggccactcgtggtctgatcgctggtggcgccgacctg
atcctgatcgaaaccatcttcgacacgctaaacgccaaggcagcgatcttcgccgtgcag
caggtgttcgatgaagacgcagtcgagttgccgatcatgatttccggcaccatcaccgat
gcctccggccgcaccctgtctggccagaccaccgaagccttctggaactcggtacggcac
gccaaccctatctccgtcggcctgaactgcgcccttggcgccaaagacctgcgcccgtac
ctggaagagctgtcgaacaaggccgacacccatgtgtccgcccaccccaacgccggcctg
cccaacgctttcggtgaatacgacgagagcccggtagaaatggccgcggtggtcgaagag
ttcgccgccagcggctttctcaacatcatcggcggttgctgcggcaccaccccggcgcat
atccaggcgattgccgaagcagtggccaaataccagccccgcgccattccagagattccc
aaggcctgccgtctgtcgggcctcgagccgttcaccatcgaccgcaagtcgctgttcgtc
aacgtcggcgaacgcaccaacatcaccggctcggccaagttcgcccgcctgatccgcgag
gaaaactacaccgaagcgctggaggtcgccctgcagcaggtggaagccggcgcccaggtg
atcgacatcaacatggacgagggcatgctcgactccaaggcggccatggttcgcttcctg
aacctgatcgccggcgagccggacatctcccgcgtgccgatcatgatcgactcctccaag
tgggaagtgatcgaggcgggcctgaagtgcattcagggcaagggcatcgtcaactcgatt
tccatgaaggaaggcgtcgagcagttcaagcaccacgccaagctgtgtaagcgttacggc
gccgccgtggtggtgatggccttcgacgaagtcggccaggccgacaccgccgcgcgcaag
aaggaaatctgccagcgcagctacgacattctggtcaacgaagtaggcttcccgccggaa
gacatcatcttcgacccgaacatcttcgccgtggccaccggcatcgaggaacataacaac
tacgccgtggacttcatcgaagcctgcgccttcattcgcgacaacctgccctacgccttg
agctcgggcggcgtgtccaacgtgtcgttctcgttccgtggcaacaacccggtgcgcgag
gcgatccactcggtgttcctctactacgccatccagaacggcctgaccatgggcatcgtc
aacgccggccagttggaaatctacgacgagattcccaaggagctgcgcgaccgcgtcgag
gatgtggtgctcaaccgcacgccaggcggtaccgacgccctgctggccatcgccgacaat
taccgtggcggcggcgcgaccaaggaagtcgagaacgaagagtggcgctcgctgccagtc
gacaagcgcctggagcacgcgctggtaaaaggcatcaccgcctttatcgtcgaagacacc
gaggagtgccgccagcagtgcgcgcggcccatcgaggttatcgaaggcccgctgatgagc
ggcatgaacgtggtcggcgacctgttcggctcgggcaagatgttcctgccccaggtagtc
aaatctgcgcgggtgatgaagcaagcagttgcgcacctgatcccgttcatcgaagccgaa
aaaggcgacaagccggaagccaagggcaagatcctgatggccaccgtgaaaggcgacgtg
cacgacatcggcaagaacattgttggcgtggtgctgggctgtaacggctacgacatcgtc
gacctcggcgtgatggtgccggcggaaaaaatcctgcaggccgccatcgccgaaaaatgc
gacatcatcggcctgtccggcctgatcaccccgtcgctggacgaaatggtccacgtcgcc
aaggaaatgcaacgccagggtttcaccctgccattgatgatcggcggcgcgaccacctcc
aaggcccacaccgcggtgaagatcgaccctcaatacagcaacgacgcggtggtctatgtc
accgacgcctcgcgcgctgtgggcgtggccacccagctgctgtccaaggagctaaaggcc
gatttcgtgcagaagacccgcgacgagtacgtagtggtacgtgagcgcaccgccgcccgc
gcgacccgcaccgagcgcttgagctacgacaacgccgtcgccaacaagccgacgttcgac
tggagcggttatagcgcaccgaaaccgagcttcaccggtatcaaggtgctcgacgatatc
gacctcaacgtactggccgagtacatcgactggacgccgttcttcatctcctgggacctg
gccggcaaatacccgcgcatcctcaccgacgaagtagtcggcgaagcagccaccaccttg
tttgccgatgcccaggaactgctgaagaaactgatcgacgagaagctgatcaaggcccgc
gcggtgcttggcttctggcctgccaaccaggtgcgtgacgacgatatcgaggtgtacggg
gacaacggcgagcaactcgccaccctgcaccacctgcgccagcagaccatcaagccggac
ggcaagccgaacctgtccctggccgacttcgttgcaccgaaaagcagcggcgtgactgac
tacgtgggcggctttatcaccaccgccggcatcggcgccgaggaagtcgccaaggcctac
gaggccaagggcgacgactacaacgcaatcatggtcaaggccctggccgaccgtctggcc
gaagcctgcgctgaatggctgcacgagcgcgtgcgtaaagagcactggggctatcagccg
gacgagcacctgagcaatgacgagttgatcaaggaagcctacaagggcatccgccctgcg
cctggctacccggcctgcccggaccacaccgagaaaggcacgctgttcaaactgctcgat
cccgaggcggactacaacaaggcaggccgcagcggcgtgttcctcaccgagcactacgcg
atgttcccggcagcagcagtcagcggctggtacttcgcccaccccgaggcgcagtacttc
gctgtcggcaaggtcgataaggatcagatcgaaagctacagcgagcgcaaggcgcaggac
atcagcgtcagcgaacgctggttgatgcccaacctgggctacgacgactga
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