Paraoerskovia sediminicola: GCM125_19100
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Entry
GCM125_19100 CDS
T09128
Name
(GenBank) hypothetical protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00550
Peptidoglycan biosynthesis
psek01100
Metabolic pathways
psek01502
Vancomycin resistance
psek02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCM125_19100
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCM125_19100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GCM125_19100
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psek01002
]
GCM125_19100
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psek01011
]
GCM125_19100
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
psek01504
]
GCM125_19100
Enzymes [BR:
psek01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
GCM125_19100
Peptidases and inhibitors [BR:
psek01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
GCM125_19100
Peptidoglycan biosynthesis and degradation proteins [BR:
psek01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
GCM125_19100
Antimicrobial resistance genes [BR:
psek01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
GCM125_19100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
LGFP
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
BDZ42611
LinkDB
All DBs
Position
1998334..1999446
Genome browser
AA seq
370 aa
AA seq
DB search
MARRGPGPSHVRPPTRTLWRRRAAALAGLLAVVLVVVVAVTSLAGRGEENVPLADGGAVV
PVGGTDSTDSTGSTESADGTTVATGATTRKAPPPPAAGPAVRIDPRIEPRWTELRGEAGF
LGLPSAAADCTPSASVATSCAQEFDGGSLVWRADDEDAATATYATGDIPDGAVRLAEAND
PESTYVVVNKRRELDPVDYAPDTVAIGGPDGGGRVLRADAAEAVEDLLAGVREAGMPMYA
RSAYRSYAEQRSTYSSWVSRLGKERADVESARAGYSEHQTGLAADLVPSTGPCRAYGCMA
GTDQARWIEEHAYEYGLIVRFPEGAQDVTGYIHEPWHVRYVGKALAADMRDAGEPVLETY
LGLPAAPDYD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgacgcggcccgggcccgtcgcacgtccgcccgcctacgcgcacgctgtggcgg
cgccgcgcggcagcgctcgccgggctgctcgccgtcgtgctggtggtcgtcgtcgcggtg
acctccctggcgggtcgcggcgaggagaacgtgccgctcgcggacgggggcgcggtggtc
cccgtcggtggcacggacagcacggacagcaccggcagcacggaaagcgccgacggcacg
accgtcgcgacgggcgcgacgacgcggaaggccccgccgccgcccgcggccggccccgcg
gtccgcatcgacccgcgcatcgagccgcggtggaccgagctccgcggcgaggcaggcttc
ctgggcctccccagcgctgccgcggactgcacgccctcggcgagcgtcgcgacctcctgc
gcgcaggagttcgacggcggttcgctcgtgtggcgggccgacgacgaggacgccgcgacc
gcgacgtacgcgaccggcgacatccccgacggggcggtgcggctcgccgaggcgaacgac
ccggagagcacctacgtcgtcgtcaacaagcgccgcgagctcgaccccgtcgactacgcg
cccgacacggtcgcgatcggcggcccggacggcgggggccgcgtcctgcgggccgacgcc
gccgaggcggtggaagacctcctggcgggcgtccgcgaggcaggcatgccgatgtacgcg
cgcagcgcataccgctcctacgcggagcagaggtcgacctacagctcatgggtgtcccgg
ctcggcaaggagcgggcggacgtcgagtcggcgcgcgcggggtactcggagcaccagacg
gggctcgccgcggacctcgtaccgagcaccggaccgtgccgggcctacggctgcatggcc
gggaccgaccaggcccgctggatcgaggagcacgcgtacgagtacggcctgatcgtgcgg
ttccccgagggcgcgcaggacgtcaccgggtacatccacgagccgtggcacgtgcgctac
gtcggcaaggcgctggccgcggacatgcgcgacgcgggggagccggtgctcgagacctac
ctcgggctgccggcggcgccggactacgactga
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