Pseudodesulfovibrio cashew: GM415_01945
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Entry
GM415_01945 CDS
T06353
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K22901
tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psel03016
]
GM415_01945
Transfer RNA biogenesis [BR:
psel03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
GM415_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Methyltransf_25
Ubie_methyltran
Methyltransf_23
PCMT
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QGY38947
UniProt:
A0A6I6JFY8
LinkDB
All DBs
Position
complement(434114..435397)
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AA seq
427 aa
AA seq
DB search
MTSELRTFRLVCGEADAPVVEALLSAQGFGFEPEPFYPMARKLTREPFPLGESLAARFGR
IYIQDRSSMLPPLLLDPPSGASVLDMCSAPGSKTSLLSRLVGRDGFVFASEASADRLGTL
RANLRRTGAVNVATTKAMAQDLPFSACSWDYIQLDPPCSGWGTVDKNPKVMELWSESKTA
PLVALQKTLLEKAASMLVPGGTVLFSTCTTNVEENEAQVAWALETLDLELVPLAPPPGFV
FGEPLLPGMDGVLRVAEESMGQGFFLARFRKKGGECATDGARVQKRELPGRPLRLDRTEG
GRTLALGNLPPGETYDFGGKVFFLHDQALARIPDSLRWQGALLGKIAGRGDRATFRPDGM
ARVLLPRTVKGGMVDILNVDEVEPLARLVSGQSVSFQSGKGGVGLSYRGLPLVWLSRKGK
RVMLSSK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgaacttcgcactttccggctcgtatgcggcgaggccgatgctcccgtcgtc
gaggccctactttctgctcagggattcggcttcgaacccgaaccgttctatccgatggcc
cgaaaactgacccgcgagccttttcccctcggggagagcctggccgcgcgcttcggccgt
atctacattcaggaccgctcatcaatgctgccgccgctgttgctcgatccgccttcgggg
gcaagcgtgctggacatgtgttccgcgccgggcagcaagaccagcctgctctcacgcctg
gttgggcgcgatgggttcgtgttcgcctccgaagcgtccgccgaccggttgggcaccctg
cgggccaacctccgccgcaccggcgccgtcaacgtggccacgaccaaggccatggcccag
gacctgccgttctcggcctgttcctgggattacatccagctcgacccgccctgcagcggg
tggggaaccgtggacaagaatcccaaggtcatggagttgtggtccgaatccaagaccgct
ccgctggtagctttgcaaaagacgctcctggaaaaggcggcgtctatgctcgtccccgga
ggcacggtcctgttttccacctgcacgaccaatgtggaggagaacgaggcgcaggtggcc
tgggcgctggagacgttggatctcgaattggtgccgcttgctccgccgccgggattcgtt
ttcggagagccgttgctgcccggcatggatggcgtcctcagggtggccgaggagtccatg
ggacaggggttcttcctggcccgcttccggaaaaagggaggggagtgcgcaacggacggt
gcccgcgtgcaaaaacgggaactgccggggcgtccgctgaggctggaccgcactgaaggc
gggcgcacgttggctctgggcaaccttccgcccggcgagacctatgacttcggcggcaag
gtcttttttctgcacgaccaggcgctggctcgcatcccggactcgttgcgctggcagggg
gctctgttgggcaagatcgctgggcgcggcgaccgagccacttttcggcccgacggcatg
gcccgcgtcctgctgccgaggacggtaaaaggcggtatggtggacatactgaatgtggat
gaggtcgagccccttgcgcgtttggtatcagggcagagtgtttccttccagtccggcaag
ggtggggtggggctatcttatcgcggtctccctctggtttggctttcccgcaaggggaag
cgggttatgttgtccagtaaatag
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