KEGG ORTHOLOGY: K22901

ORTHOLOGY: K22901

Entry

K22901                      KO

Symbol

trm4

Name

tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]

Brite

KEGG Orthology (KO) [BR:ko00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis
    K22901  trm4; tRNA (cytosine40_48-C5)-methyltransferase
Transfer RNA biogenesis [BR:ko03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    K22901  trm4; tRNA (cytosine40_48-C5)-methyltransferase

Other DBs

COG:

COG0144

GO:

0016428

Genes

CFF:	CFF8240_1122

CFT:	CFF04554_1150

CFV:	CFVI03293_1120

CFX:	CFV97608_1175

CFZ:

CSG_8720

CAMP:

CFT03427_1100

CFP:	CR44_05595

CCC:	G157_05580

CCQ:

CCF:

CCY:

CCOI:

CCOF:

VC76_03195(rsmF)

CCOO:

ATE51_02320(rsmF)

CAJ:	CIG1485E_1168

CIS:

CINS_0912

CHYO:

CHH_0637

CHV:	CHELV3228_0875

CUX:	CUP3940_0761

DAS:

Daes_2935

DPI:

BN4_12665

DEJ:	AWY79_17690

PPRF:

DPRO_1414

PSEL:

GM415_01945

DDN:	DND132_2848

LIP:

LI0844

LIR:

LAW_00874

DSX:	GD604_07010

DSD:	GD606_00245

PCAY:

CALE:

BPRS:

PCAT:

CGO:	Corgl_0731

CSTC:

LK434_04180

COLL:

KPC83_02330

CBAC:

JI75_00600

BWA:	HLV38_04970

MJA:

MJ_0026

MFE:	Mefer_1246

MVU:	Metvu_0959

MFS:	MFS40622_0956

MIF:	Metin_0874

MJH:	JH146_1530

MESG:

MLAUSG7_1259(trm)

MESA:

MLASG1_0519(trm)

MIG:	Metig_0195

MMP:

MMP1126

MMQ:	MmarC5_0458

MMX:	MmarC6_1541

MMZ:	MmarC7_0378

MMD:

GYY_06455

MMAK:

MMKA1_13000

MMAO:

MMOS7_12350

MMAD:

MMJJ_17190(rsmF)

MAE:

Maeo_1457

MVN:	Mevan_0449

MVO:

Mvol_0174

MOK:	Metok_1582

METF:

CFE53_06630

MKA:	MK0370 MK0673

AFU:

AF_2039

AFG:	AFULGI_00023060

APO:	Arcpr_0486

AVE:	Arcve_0341

AST:	Asulf_00441

FPL:

GAC:

GAH:

PFU:

PFI:

PHO:	PH1374(PH1374)

PAB:

PAB0523

PYN:

PNA2_1957

PYA:	PYCH_09980

PYS:

Py04_1213

PYC:	TQ32_10600

TKO:

TON:

TGA:

TSI:

TBA:	TERMP_00047

THE:

THA:

THM:

TLT:

THS:

TNU:

TEU:

TGY:	X802_10715

THV:	ADU37_CDS01790

TCH:	CHITON_1534

TPEP:

A0127_00720

TPIE:

A7C91_08185

TGG:	A3K92_03205

TCE:	A3L02_09190

TBS:	A3L01_02870

THH:	CDI07_02825

TSL:	A3L11_06825

TTD:	A3L14_04470

TPRF:

A3L09_07925

TRL:	A3L10_03665

TPAF:

A3L08_05850

THY:	A3L12_05885

TIC:	FH039_05210

TCQ:	TIRI35C_0801

THEM:

THEI:

TAGG:

PPAC:

MPD:

MEZ:

RCI:

ABI:

ACF:	AciM339_1435

APE:

APE_0514

ACJ:

ACAM_0397

SMR:

Smar_1432

SHC:	Shell_1017

IHO:

IIS:

IPC:

DKA:

DFD:	Desfe_0688

DMU:	Desmu_0326

TAG:

Tagg_0414

TCS:	IMZ38_05490

IAG:

Igag_1475

THG:	TCELL_0930

HBU:

Hbut_1559

PFM:	Pyrfu_0210

PDL:	Pyrde_0479

STO:

STK_02990

SOH:	D1869_01035

SJV:	SJAV_12780

SSO:

SOL:

SSOA:

SSOL:

SSOF:

SSHI:

SCAS:

SIS:	LS215_1997

SIA:	M1425_1888

SIM:	M1627_1965

SID:

M164_1895

SIY:	YG5714_1964

SIN:	YN1551_0956

SII:

SIH:

SIR:

SIC:

SULA:

SULE:

SAI:

SACN:

SACR:

SACS:

SULO:

SULL:

MSE:

MEMJ:

MPRU:

MCN:

MHK:	DFR87_07005

MTEN:

GWK48_05160

MJN:	MjAS7_0594

AHO:

AMAN:

ABRI:

ASUL:

AAMB:

ACIH:

SACD:

SAZO:

CSTY:

STEP:

SMET:

SAHS:

ASC:

ACIA:

CLG:	Calag_1460

FFO:	FFONT_1025

NGA:	Ngar_c13900

NVN:	NVIE_001470

NEV:

NTE_01459

TAA:	NMY3_01420(rsmF)

NFN:	NFRAN_2315(rsmF)

CCAI:

NAS2_0048

NEQ:

NEQ295

LOKI:

Lokiarch_37430(trm4_1)

LOB:	NEF87_003663

» show all

Reference

PMID:20600111

Authors

Kuratani M, Hirano M, Goto-Ito S, Itoh Y, Hikida Y, Nishimoto M, Sekine S, Bessho Y, Ito T, Grosjean H, Yokoyama S

Title

Crystal structure of Methanocaldococcus jannaschii Trm4 complexed with sinefungin.

Journal

J Mol Biol 401:323-33 (2010)
DOI:10.1016/j.jmb.2010.06.046

Sequence

[mja:MJ_0026]

LinkDB

DBGET integrated database retrieval system