Pseudodesulfovibrio cashew: GM415_03870
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Entry
GM415_03870 CDS
T06353
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel01501
beta-Lactam resistance
psel01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GM415_03870
01503 Cationic antimicrobial peptide (CAMP) resistance
GM415_03870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psel02000
]
GM415_03870
01504 Antimicrobial resistance genes [BR:
psel01504
]
GM415_03870
Transporters [BR:
psel02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GM415_03870
Antimicrobial resistance genes [BR:
psel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GM415_03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QGY39291
UniProt:
A0A6I6JB47
LinkDB
All DBs
Position
complement(871460..874606)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSEFFIRRPIFAWVIAIVIMLGGLLALRTLSISQYPEIAPTTVRITCTYPGADAKTVENS
VTKVIEQGMTGIDYLDYMTSTSTSTGRAEISLTFTNAADPDVAQMQVQNKLQQVTSQLPD
VVQSNGLSVTKSSASFLMVLGFVSTDDTMTSTDIADFVDSSLNDTLKRVEGVGDTRLFSS
SYAMRIWLNPDKLTEFSLMPSDVARAIEAQNTQISAGQLGGLPAVRGQQLNATITARSRL
QTPEQFRDIIIKSSPDGSVVRIRDVARVELDAESYTTSTTYNKHPTAGLAIQLATGANAI
QTAEAVEKTIAELTPTFPSGVEVVYPYDTTPFVKLSIEDVIETLIEAIVLVFIVMLLFLQ
NVRATFIPTIAVPVVLLGTFAVLSIMGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
ATEGLGPREATRKSMKEISGALVGIATVLSAVFVPMAFFGGSVGVIYRQFSVTIVSAMLL
SVVVALILTPALCATMLKPAHGESKSRFFGWFNRAFDFGTNAYHDGTAWMLRRTGRFLLV
FVLITGVMGWMFYRLPSSFLPMEDQGILIAMVQLPTGATQERTKRVLTEVSDHFLNNEKE
AVEGVLTVAGFSFSGAGQNVGIGFIRLKPFEERKDPSLSAQAVAGRAMGAFFRNREARIF
CLAPPAIHGMGNSNGFDFYLRDINGAGHQQLMAVRNQFLGMAAKSPLLANTRPNGQEDEP
QYHIDIDQEKASAFGLSFSDINTTLSTAWGSDYVNDFIDRGRVKPVYLQGDKGFRMQPED
VNRWFVRNDKGGMVPFASFANGRWTYDSPRLERYNGSSALEIQGQAAQGVSSGDAMAEVR
RLVAQLPPGYAMSWTGLSAQEELSGNQAAPLYAISVLVVFLCLAALYESWSIPFAVIMAV
PIGIFGALLAASTFGQSNDVYFKVGLLTTIGLTAKNAILIVEFAVAEQAAGLDVIKATLK
AARLRLRPILMTSFAFILGVLPLAVASGAGSGAQNSVGIGVMGGMLSATVLGVFFIPLLY
VGLRKVFKYKPPVDWDEPETPGSGEGSA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaattcttcatccggcggcccatcttcgcctgggtcatcgctatcgtcatcatg
ctcggcggcctgctggccctgcggaccctgtccatctcccagtatcccgagatcgctccg
accaccgtccggatcacctgcacctatcccggcgcggacgccaagaccgtggagaactcg
gtgaccaaggtcatcgagcagggcatgaccggcatcgactatctggactacatgacctcc
acctcgacctccacgggtcgggcggagatatccctgaccttcaccaacgccgccgacccc
gacgtggcccagatgcaggtccagaacaagctccagcaggtcacctcccagttgccggac
gttgtccagagcaacggactgagcgtgaccaagtcgtcggccagtttcctgatggtcctc
ggtttcgtctccacggacgacaccatgacctccacggacatcgccgacttcgtggacagc
tccctgaacgataccctcaagcgcgtggagggcgtgggcgacacccggctgttctcctcg
tcctacgccatgcgcatctggctcaacccggacaagctcaccgagttttcgctgatgccc
agcgatgtggcccgggccatcgaggcccagaatacgcagatttccgccggccagctcggc
ggcctgcccgcagtacggggccagcagctcaacgcgaccatcaccgcgcgcagccgactg
cagacccccgagcagttccgggatatcatcatcaagagttctcccgacggttcggtggtg
cgcattcgcgacgtggccagagttgagctcgacgccgagagctacaccaccagcaccaca
tacaacaaacatcccactgcggggctggccatccagttggccaccggggccaacgccatc
cagaccgccgaggccgtggaaaagaccatcgccgagctcacgcccacgttcccgagcggc
gtggaggtcgtctatccctacgacacaacgcctttcgtcaagctctccatcgaggatgtg
atcgagaccctgatcgaggccatcgtcctggtcttcatcgtcatgctcctgttcctgcag
aacgtccgggccacgttcatcccgaccattgccgtgcccgtggttctgctcggaaccttc
gcggtgctttcgataatggggtattccatcaataccctgaccatgttcgccatggtcctg
gccatcggcctcctggtcgatgatgccatcgtcgttgtcgagaacgtggagcgcgtcatg
gccacagaagggctcggcccccgcgaggccacgcgcaagtccatgaaggagatctccggc
gcactggtgggcattgccacggttttgtccgcagtcttcgtgcccatggccttcttcggc
ggctcggtgggcgtcatttaccgccagttctcggtgaccatcgtctcggccatgctcctg
tccgtggttgttgcgctgattctgaccccggccctgtgcgccaccatgctcaaacccgct
cacggcgagagtaaatcccgcttcttcggctggttcaaccgggcgttcgatttcggcacc
aacgcctatcacgacggaacggcctggatgcttcgccgcaccgggcgcttcctgctggtc
ttcgtgctcatcaccggggtcatgggctggatgttctaccgactgcccagttcctttctg
cccatggaggaccagggcatcctgatcgccatggtccagcttcccacgggagccacccag
gagcggaccaagcgggttctgaccgaggtcagcgaccactttttgaacaatgagaaggag
gccgttgaaggcgttctcaccgtggccgggttcagcttcagcggcgcgggccagaacgtg
ggcatcggcttcatccggctcaagccctttgaggaacgcaaggacccctccctgtcggcc
caggcagtggccgggcgggccatgggcgcattcttcagaaaccgtgaggcccggatcttc
tgccttgctccgcccgccattcatgggatgggcaactccaacggcttcgacttctacctg
cgggacatcaacggtgccggacatcagcagctcatggccgtgcgcaaccagttcctgggc
atggccgccaagagtccgctactggcaaacacccggcccaacgggcaggaggatgagccc
cagtatcacatcgacatcgaccaggagaaggccagtgcgttcgggctctccttctcggat
atcaacaccaccctgtccacggcctggggcagtgactacgtcaacgacttcatcgaccga
ggccgcgtcaagccggtctacctgcagggagacaagggcttccgcatgcagcccgaggac
gtgaaccgctggttcgtgcgtaacgacaagggcggcatggttcccttcgcctcctttgcc
aatgggcgctggacctacgactccccgcgccttgagcgttacaacggttcctccgccctg
gagattcagggccaggccgcccagggggtcagctccggcgacgccatggccgaggtccgg
cggctggtcgcccagcttccgcccggctatgccatgtcctggacgggcctctccgcccag
gaggaactctccggtaaccaggccgcgccgctctatgccatctcggtgctggttgtcttc
ctctgtctggccgctctgtatgagagttggtccatcccgttcgcggtcatcatggccgtg
cccatcggcatcttcggcgcgctgctggcggcgagcaccttcgggcaaagcaacgacgtc
tacttcaaggtcggcctgctgacgaccatcggcctgactgccaagaacgccatcctcatc
gtggagttcgccgtggcggagcaggccgccggcctggacgtcatcaaggccaccctcaag
gcggcccggctgcgtctgcgcccgatcctgatgacctcgttcgccttcatcctcggcgtt
ctccccctggccgtggcctcgggagccggttccggcgcgcagaactccgtcggtatcggc
gtcatgggcggcatgctctcggccaccgtgctgggcgttttcttcatcccgctgctctac
gtgggcctgaggaaggtcttcaagtacaagcccccggtggactgggacgaacccgaaacc
cccggaagcggggagggctcggcctag
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