Pseudodesulfovibrio cashew: GM415_03875
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Entry
GM415_03875 CDS
T06353
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel01501
beta-Lactam resistance
psel01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GM415_03875
01503 Cationic antimicrobial peptide (CAMP) resistance
GM415_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psel03036
]
GM415_03875
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psel02000
]
GM415_03875
01504 Antimicrobial resistance genes [BR:
psel01504
]
GM415_03875
Chromosome and associated proteins [BR:
psel03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GM415_03875
Transporters [BR:
psel02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GM415_03875
Antimicrobial resistance genes [BR:
psel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GM415_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF5638
Prot_ATP_ID_OB_N
OEP
DUF6799
Motif
Other DBs
NCBI-ProteinID:
QGY39292
UniProt:
A0A6I6JFV7
LinkDB
All DBs
Position
complement(874615..875844)
Genome browser
AA seq
409 aa
AA seq
DB search
MYNKVSTPPRAATLLALACLLLTVVLAGCDEKTSEAKGAPAAPVEVGIIALHPQAVPLNT
ELPGRTTASLVAEVRPQVDGIIRERLFREGSEVHAGEVLYRVAPSTYQAEYSNALAALKR
AQASLPSSESKAKRYAELIGQGAISKQDYQDAKAVFEADLAAVASAKAALESAKISLDYT
EIKAPISGRVEMSDLTPGALVTANQSAPLTTIRQLDPINVDLTQSSTTMLNLRQAIASGV
ITVEGKTMTVKLKLENGTVYPYEGTVEFSGAKVDEATGTYTLRAEFPNPDRLLLPGMYVR
AIIQDGVFQNCYLVPQRAVGRTPKGEPVGLFVDKDGKVEQRILDVRRSYGNSWLVGSGIS
DGDRLVVQGSQFIRAGQTVTVKEMILDDATGEIRPAQAPATPAAESKEG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtataataaagtttcgacccctccccgtgcggcgaccctgctggccctggcctgcctg
ctgctcacggtcgtcctggcaggatgcgacgagaagacgtccgaggccaagggcgctcct
gccgcgcccgtcgaggtcggcataatcgccctgcatccacaggccgtgccgctgaatacc
gagcttccgggccggaccaccgcttcgctggtggccgaagtccgcccccaggtggacggc
atcattcgcgagcggctcttccgcgagggtagcgaggtccatgccggtgaagtgctctac
cgggttgcgccttccacctaccaggccgagtacagcaacgccctggctgccctgaagagg
gctcaggcctccctgcccagctccgagagcaaggccaagcgctacgccgaactgatcggc
cagggagccatctccaagcaggactatcaggacgccaaggccgtgttcgaagccgatctg
gccgccgtggcctcggccaaggccgccctggagagcgccaagatcagcctggactacacc
gagatcaaggcccccatcagcggccgcgtggaaatgtccgaccttaccccgggagccctg
gtcacggccaatcagagcgcgcctctgacgaccatccgtcagcttgaccccatcaacgtg
gacctgacccagtcgagcaccaccatgctcaacctgcgccaggccatcgcctccggcgtg
atcactgtcgagggcaagaccatgaccgtcaagctgaagctcgaaaacgggaccgtctac
ccctatgagggcaccgtcgaattttccggtgccaaggtggacgaggccaccggcacgtat
accctgcgcgccgagttccccaacccggaccgtctgctgctgcccggcatgtacgttcgg
gccattattcaggatggcgtgttccagaactgctacctggtgccgcagcgggccgtgggc
cggacccccaagggcgagcccgtgggcctgttcgtggacaaggacggcaaggtcgagcag
cgcatcctcgacgtgcgccgaagctacggcaactcctggctggtcggttccggcatcagc
gacggcgaccgcctcgtggtgcagggttcccaatttatccgtgcaggccagaccgtgacg
gtcaaggaaatgatcctggatgacgccaccggcgagatcaggcccgcgcaggctccggca
acgcctgcggcggaaagcaaggaaggctag
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