Pseudodesulfovibrio cashew: GM415_08715
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Entry
GM415_08715 CDS
T06353
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel01501
beta-Lactam resistance
psel01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GM415_08715
01503 Cationic antimicrobial peptide (CAMP) resistance
GM415_08715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psel02000
]
GM415_08715
01504 Antimicrobial resistance genes [BR:
psel01504
]
GM415_08715
Transporters [BR:
psel02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GM415_08715
Antimicrobial resistance genes [BR:
psel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GM415_08715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QGY40205
UniProt:
A0A6I6JBQ3
LinkDB
All DBs
Position
complement(1939365..1942517)
Genome browser
AA seq
1050 aa
AA seq
DB search
MVRFFIDRPVFASVMAIIILLVGTLAAISLPIAQYPEISPPSVSVRATYTGADAETVMQS
VATPIEEQVNGAQDMLYMSSISSNDGSMALTVTFELGRDLELATVDVQNRVNLATSQLPQ
EVRASGISVKKQSPDIVLIINLTSDQPQYDSLFLNNYAKINLYDALRRIQGVGDVSLFGD
KDYGMRLWLDPAKLATYRLTVSDVISAVQEQNVQAPAGQLGMPPTPEGQQFQMSLRVKGR
LADPEEFGGIILKANEDGSNVRIRDVARVELGSRNYYTFARLEGQDTASLLIYQLPGANA
LNVAHDVRKTMDELSAFFPEGVKYQIPYDTTLFVNSSIDEVTDTLVEALILVFIVVFVFL
QNWRTTIIPMVCVPVSLVGTFALFPLLDFSINTLTLFGLVLAIGIVVDDAIVVVEATQRI
IDEEGLSSKEATRKAMNEVTGPVIASTLVLVAVFIPVAFMGGITGQLYKQFALTLSVSVV
ISSINALTLSPALSALLLRPYKPIRGPLGWFFDKFNLVFDAVTKRYNKGVSMMVRRSVLG
ILVVCVFLAGAGGLFKILPSGFVPDEDQGYFIVNAMLPEAASLERTEKAVQQIEDYLKDA
PGIRSYVTLGGFSLMTGAYSSYNAALFVILDDWSERTTPDLSLSAIMGRAQKAFNGIQDG
IVMAFGPPPIRGLSSTGGLQFELQDRTGGSIDELYAVSRSFMGEANKLPEIASTFTTFSA
NVPQYYVEIDRDKVKKLGVPVNEVFQTMQTYLGGYYINDFNKYGRTYRVMAQAESKFRTN
LSSLNQFYMRSQEGQMVPLSTLSEASRITGPEYVQRYNIFPTVEITANPAPDISSGQAMA
ALEKAAAGNLPEGYGYDWTGIAYQEKNAGGQTGLIFALAIVMVFLVLAAQYESWATPFAV
ILCVPLGIFGAMASQWMRGLENNVYAQIGLVMLIGLAAKNAILIVEFAKEKHDKEGMSLT
DAAMEAAHLRFRPILMTSFAFILGVIPLVTASGAGSASRHALGTSVFGGMIAATVLGVLV
VPALYTAVQGAAGNIGSYLRKVIGFKSSKE
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggtccgctttttcatcgaccgtccggtcttcgcctcggtgatggccatcatcatcctg
ttggtaggcacactggccgccatctccctgcccattgcgcagtacccggaaatttcgccg
ccttcggtgtctgtccgggccacctacaccggcgctgacgccgagaccgtcatgcagtcc
gtggccacgcccatcgaggaacaggtcaacggcgcgcaggacatgctctacatgtcctcc
atctcctccaacgacggctccatggccctgaccgtcaccttcgagctgggccgcgatctg
gagctggccactgtcgacgtgcaaaaccgcgtcaacctggccacctcgcaattgccgcag
gaagtccgagcctcgggcatctcggtgaagaagcagtcgcccgacatcgtcctgatcatc
aacctgacatcggaccagccccagtacgattccctgttcctgaacaactacgccaaaatc
aacctgtacgacgcgcttcggcgaatccagggcgtgggcgacgtctccctgttcggcgac
aaggactacggcatgcgcctctggctggacccggccaagctcgccacctaccggctgacc
gtcagcgacgtcatcagcgccgtgcaggagcagaacgtccaggccccggccggtcagctc
ggcatgccgccgacgcccgaggggcagcagttccagatgtccctgcgcgtcaagggccgc
ctggccgatcccgaagagttcggcggcatcatcctcaaggccaacgaggacggctcaaac
gtgcgcatccgggacgtggcccgcgtggagctgggctcgcgcaactactacacattcgcc
cgcctggagggacaggacaccgcgtccctgctcatctaccagctgcccggcgccaacgcc
ctgaacgtggcccacgacgtgcgcaagaccatggacgagctgtcggcgttcttcccggaa
ggcgtcaaataccagattccctacgacaccaccctcttcgtcaactcgtccatcgacgag
gtcacggacacccttgtcgaggcgctcatcctggtcttcatcgtggttttcgtcttcctc
cagaactggcgtacgaccatcatccccatggtctgcgtgccggtttcactggtgggaacc
ttcgccctgttcccgctgctcgacttttccatcaacaccctgaccctgttcgggctggtg
ctggccatcggcatcgtggtcgatgacgccatcgtcgtggtcgaggccacccagcgcatc
atcgacgaggaggggctctcgtccaaggaagccacccgcaaggccatgaacgaggtcacc
ggcccggtcatcgcctccaccctggtgctggtggccgtgttcatcccggtcgccttcatg
ggcggcatcacgggccagctctacaagcagttcgccctgaccctctcggtctcggtggtc
atctcgtccatcaacgcactgaccctgtccccggctttgtccgcgctgctgctgcggccc
tacaagccgatccgcggtcccctgggctggttcttcgacaagttcaacctggtcttcgac
gccgtgaccaaacgctacaacaagggcgtctccatgatggtcaggcgctccgtcctgggc
atcctggtggtctgcgtcttccttgcgggcgcgggcgggctgttcaagatcctgccttcg
ggcttcgtcccggacgaggaccagggctacttcatcgtcaacgccatgctgccggaagcg
gcctccctggaacgcaccgaaaaggcggtccagcagatcgaggactacctcaaggacgcc
cccggcatccgcagctacgtcaccctgggcggattcagcctgatgaccggggcttactcc
tcgtacaacgccgccctcttcgtcatcctggacgactggtccgaacggaccacaccggac
ctgagcctgtcggccatcatgggacgggcgcaaaaggccttcaacggcatccaggacggc
atcgtcatggccttcggcccgccacccatccggggcctgagttccactggcggcctccag
ttcgaattgcaggaccgcaccggcggctccatcgatgagctgtacgccgtatcccgcagc
ttcatgggcgaggccaacaagctcccggagatcgcctccaccttcaccacgttctcggcc
aacgtgccgcagtactacgtggagatcgaccgcgacaaggtcaagaaactaggcgtgccg
gtcaacgaggtcttccagaccatgcagacctacctgggcggttactacatcaacgacttc
aacaagtacgggcgcacctaccgcgtcatggcccaggccgaatccaaattcaggaccaac
ctcagttccctgaaccagttctacatgcgctcccaggagggccagatggttccgctctcc
accctgagcgaagcgtcccgtatcaccgggccggagtacgtccagcgttacaacatcttc
cccaccgtagagataacggccaacccggccccggacatcagctcgggccaggccatggcc
gccctggaaaaggccgccgcaggcaacctgcccgagggctacggctacgactggaccggc
atcgcctaccaggagaagaacgcgggtggccagaccgggctcatctttgccctggccatc
gtcatggtcttcctggtcctggcggcccagtacgaatcctgggccacgccgttcgcggtc
atcctctgcgtgcccctgggcatcttcggagccatggcctcccagtggatgcgcgggctt
gagaacaacgtctacgctcagatcgggctggtcatgctcatcggcctggcggccaagaac
gccatcctgatcgtggagttcgccaaggaaaagcatgacaaggaagggatgtccctgacg
gacgcggccatggaggccgcgcacctccgcttcaggcccatcctgatgacctccttcgcc
ttcatcctcggcgtcatcccgctggtgaccgcttcgggagcgggctcggccagccgccat
gctctgggaacctcggtcttcggcggcatgatcgcggccacggtgctcggcgtcctcgtg
gtgcctgccctgtacaccgccgtgcaaggtgcggcgggcaacataggctcgtatctgcgg
aaggtaatcggcttcaagtcctccaaggaatga
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