Pseudodesulfovibrio cashew: GM415_13275
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Entry
GM415_13275 CDS
T06353
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GM415_13275 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_13275 (nth)
Enzymes [BR:
psel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GM415_13275 (nth)
DNA repair and recombination proteins [BR:
psel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GM415_13275 (nth)
Prokaryotic type
GM415_13275 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
TPR_6
HHH
SBDS_N
Motif
Other DBs
NCBI-ProteinID:
QGY41055
UniProt:
A0A6I6JE00
LinkDB
All DBs
Position
complement(2927528..2928163)
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AA seq
211 aa
AA seq
DB search
MRKKERAKEIYDRLAKRYPSPEPALHWSTPWELLVATALSAQCTDERVNMVTPVFFERWP
EISDVAEADVTDIEDVVRSTGFFRNKAKNLKAAATRIMEVYGGEVPKTMAELITLGGVAR
KTASIVLANAFGVNEGIAVDTHVKRLAFRMGLTTKTDPIQIEKDLMPLYPREQWGDVNHL
LVFFGREVCPARKPKCDECELNDICPKKGVK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagaaagaacgcgcaaaggaaatatacgaccggctggccaaacgctatccctcg
cccgagcccgccctgcactggtccacgccgtgggaactgctggtggccactgcgctctct
gcccaatgtactgatgaacgggtgaacatggtcacacccgtcttcttcgagcggtggccg
gagataagcgacgtggccgaggccgacgtcaccgacatcgaggacgtggtccgctccacg
gggttcttccgcaacaaggccaaaaacctcaaggctgcggccaccaggatcatggaggta
tacggcggcgaggtgccgaagaccatggccgaactcatcaccctgggcggcgtggcgcgc
aagaccgcctccatcgtccttgccaacgccttcggcgtaaacgagggcatcgccgtggac
acccatgtgaagcggctcgccttccgcatgggcctgacaaccaaaaccgaccccatccag
atcgagaaggatctcatgccgctctatccccgtgagcaatggggcgatgtgaaccatctg
ctcgtcttcttcggccgcgaggtctgccctgcccgcaaacccaaatgcgatgagtgcgaa
ttaaacgacatctgtccgaaaaagggagtgaaataa
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