Pseudomonas sp. MRSN12121: TO66_29280 Help Entry TO66_29280        CDS       T03702                                  Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism psem  Pseudomonas sp. MRSN12121 Pathway psem03030   DNA replication psem03410   Base excision repair psem03420   Nucleotide excision repair psem03430   Mismatch repair Brite KEGG Orthology (KO) [BR:psem00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     TO66_29280    03410 Base excision repair     TO66_29280    03420 Nucleotide excision repair     TO66_29280    03430 Mismatch repair     TO66_29280  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:psem03032]     TO66_29280    03400 DNA repair and recombination proteins [BR:psem03400]     TO66_29280 Enzymes [BR:psem01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      TO66_29280 DNA replication proteins [BR:psem03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      TO66_29280 DNA repair and recombination proteins [BR:psem03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      TO66_29280    NER (nucleotide excision repair)     GGR (global genome repair) factors      TO66_29280    MMR (mismatch excision repair)     DNA ligase      TO66_29280   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       TO66_29280 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase RNA_ligase HHH_5 Motif Other DBs NCBI-ProteinID:  AJO81164 LinkDB All DBs Position 6419909..6421609 Genome browser AA seq 566 aa AA seqDB search MPYASFPLAGLILTSFALISLALPTAAGACPAWTPAQARGEMLALQQHIERWDDSYHREG LSPVADELYDQSRARLEQWQGCFPEIAVEPGNPLRTARGTVPHPIAHTGVAKLADASAVQ RWLAGREEVWVQPKVDGVAVTLIYRQGRFQQAISRGDGLRGQDWTGPARLIDAIPKRLPE PRDLLLQGELYWRQDRHIQARAGSQNARSQIAGLLARNALEMRQASQVGLFVWDWPQGPD TLPERLAGLEALGFPLSGEYSQRVNTLAEVRQWREHWYRSALPFASDGIVLRQSRRPEAQ RWQARAPYWIAAWKYPHAQALALVRKVDFRVGRTGRITPVLELEPVRLDDRQIRRVSLGS LARWQELDIRPGDQVAISLAGLTIPRLDRVVVRASRRPPVQAPDAGAFHTLSCWQPVPGC KSQFLARLAWLSGKSGLDLPHVGPGTWNTLLDAKLINGLVDWLTLDPAELANIAGLGERS TARLLNSLRSARQQPFHRWLKALGLPPTGNAGLEHGWEALAARTTEQWQTESAIGPERAA QLSAFFRDPQVLALREKLRAAGIEGF NT seq 1701 nt NT seq  +upstreamnt  +downstreamnt atgccctacgcctcatttccgctggccggtctcatcctgacctccttcgccctgatctcc ttggccctgccgaccgccgccggtgcctgcccagcctggacgcctgcccaggcgcgcggc gaaatgctcgccctgcagcagcacatcgagcgctgggacgacagctaccaccgcgagggc ctgtcgccagtggccgacgagctttacgaccagtcccgcgcccggctcgagcaatggcag ggctgctttcccgagattgccgtcgagcccggcaacccgctgcgcaccgcccgcggcacc gtcccccaccccatcgcccataccggcgtggcgaagctggccgacgccagcgccgtgcag cgctggctcgccgggcgcgaggaggtctgggtacagcccaaggtcgacggcgtggcggtg acgctgatttatcgccagggacggttccagcaagccatcagccgcggcgatggcctccgg ggccaggattggaccggcccggcccgattgatcgacgccatccccaaacgcctgcccgaa cctcgggacttgctgctccagggggaactctattggcgccaggaccggcacatccaggcc agggccggcagccagaatgcacgcagccagatcgccggcctgctggcgcgcaacgcgctg gagatgcggcaggccagccaggtcggcctgttcgtctgggactggccgcagggcccggac accctgccggagcggctggccggcctcgaggccctgggctttcccttgagcggcgaatac agccagcgcgtcaatacgctcgccgaagtccgccaatggcgagaacactggtaccgatcg gccctgcccttcgccagcgacggcatcgtcctgcgccagagccggcgcccggaagcccaa cgctggcaggcccgggcgccctactggatcgccgcctggaagtacccgcacgcccaggcc ctggctctggtgcgcaaggtcgacttcagggtcggccgcacggggcggatcaccccggtg ctcgaactcgagccggtgcggctggacgaccgccagatcaggcgagtgagcctggggtcg ctggcacgctggcaggaactggacatccgccccggcgaccaggtggcgatcagcctggcc ggcctgaccataccgcgcctggatcgcgtggtagtgcgagccagccggcggccgccggtg caggctccggacgccggcgcgttccacaccctcagttgctggcagccagtgcccggctgt aaaagccagttcctggcacgcctggcctggctcagcggcaaatccggactggacctgccg cacgtggggccgggcacctggaatacacttctggacgcaaaactgatcaacggactggtc gattggttgaccctcgaccccgcagagcttgctaacattgccggccttggcgagcgcagc accgcgcgcctgctgaacagcctgcgcagtgcccggcaacagccattccatcgatggctc aaggccctcggattgccaccgaccggaaatgccgggctcgaacacggctgggaagcactg gcagccaggaccaccgaacaatggcagaccgaaagcgcaatcggcccggaacgcgccgct cagttgagcgccttcttccgcgatccgcaggtcctggccttgagagaaaaattacgcgcc gccggcatcgagggtttctga

DBGET integrated database retrieval system