Pseudanabaena sp. ABRG5-3: ABRG53_2018
Help
Entry
ABRG53_2018 CDS
T05820
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser00550
Peptidoglycan biosynthesis
pser01100
Metabolic pathways
pser01502
Vancomycin resistance
pser02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABRG53_2018
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABRG53_2018
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ABRG53_2018
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pser01002
]
ABRG53_2018
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pser01011
]
ABRG53_2018
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pser01504
]
ABRG53_2018
Enzymes [BR:
pser01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
ABRG53_2018
Peptidases and inhibitors [BR:
pser01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
ABRG53_2018
Peptidoglycan biosynthesis and degradation proteins [BR:
pser01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
ABRG53_2018
Antimicrobial resistance genes [BR:
pser01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
ABRG53_2018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
T2SSC
Motif
Other DBs
NCBI-ProteinID:
BBC24275
UniProt:
A0A2Z5WY96
LinkDB
All DBs
Position
complement(2230429..2231355)
Genome browser
AA seq
308 aa
AA seq
DB search
MPTQNDIPIAQRVSDPQRSPQKQVPANPVVRSLQAVPWWGYGLAVLAFLSPIVSTRIWFA
LNANATNPPQAVSTAEKVSSTEPKAEPQTERPSTIPTVAPFISTSTPPSSSKAASDNPDV
VANEPDSPPDLFGHHPYKEAPANQLRTISRASDGYEIKLREAAAKSYLAMEAAAKADGVD
FVVISGFRTIAEQQQLFFEISKQRNQTPAQRAKVSAPPGHSEHHTGYAMDLGDASVPSAN
LSTSFEKTAAFQWLQNNAAKYGFEMSFPPNNSQGVMYEPWHWRFVGDDESLATFYKKQPR
SGSFIKKS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcctacccaaaatgatatccccattgcccaaagggtcagcgatccccagcgatcaccc
caaaagcaagtaccagccaatcctgttgtgcgatcgctacaggcggttccttggtgggga
tatggtttagcagtattagcctttctctcgccgatcgttagcacccgcatttggtttgcc
ctgaatgctaatgccaccaatcccccgcaggcagtatccacagctgaaaaagtttcctca
acagaacccaaagcagaacctcaaaccgagcgtccctcaactattccaacagttgcacca
tttataagtacgagtacacccccctcctcgagtaaagcagctagtgataatcctgacgta
gttgccaatgagcctgatagtcctcccgatctctttggacatcacccttacaaagaagct
cctgctaatcaactacgcaccattagtagagcaagtgatggctatgaaatcaaactgagg
gaggcggcggcaaaaagttatctggctatggaggcggcggcaaaggctgatggtgttgat
tttgtggtgatttctgggtttcggacgatcgctgagcagcaacaacttttttttgagatc
agtaagcaacgtaatcaaaccccagcccaacgcgctaaggtcagtgcgccccctggacat
agtgagcatcacacgggctatgccatggatctaggtgacgcatcggttccaagtgccaat
ctgtcaactagtttcgagaaaactgctgcttttcaatggctgcaaaataatgcagctaag
tacggctttgaaatgtccttcccacccaataattctcagggtgtgatgtatgagccttgg
cattggcgctttgtcggtgatgatgaaagtctggctactttctacaaaaagcaaccacgt
agtggctcatttattaaaaagtcatga
DBGET
integrated database retrieval system
