Pseudanabaena sp. ABRG5-3: ABRG53_3666
Help
Entry
ABRG53_3666 CDS
T05820
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABRG53_3666 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pser03400
]
ABRG53_3666 (nth)
Enzymes [BR:
pser01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABRG53_3666 (nth)
DNA repair and recombination proteins [BR:
pser03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABRG53_3666 (nth)
Prokaryotic type
ABRG53_3666 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BBC25923
UniProt:
A0A2Z5X387
LinkDB
All DBs
Position
complement(4057700..4058356)
Genome browser
AA seq
218 aa
AA seq
DB search
MGIITKRSSKKVRANEILIRLKRLYPDATCSLDYETPVQLLVAVILSAQCTDERVNMVTP
KLFARFPDAIALANADLDELMELVHSTGFYRNKAKNIRGACEMIMRDFDGRVPNTMEKLL
KLPGVARKTANVVLAHAYGINAGVTVDTHVKRLTKKLGLTKFEEPIKVERDLMSLLPQRD
WENWSIRIIYHGRAVCNARKPACDRCELADLCPSASVK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgggaattattaccaaacgttcatctaaaaaagttcgagctaacgagatcctcattcgc
ctgaaacggttatatcccgatgccacctgttccctagattatgaaacccctgtgcagctt
ttagtagcggtaattctctcggctcaatgcaccgatgagcgggtgaatatggtgacaccc
aaattatttgcccgttttcccgatgcgatcgccctagccaatgctgatcttgatgaactc
atggaattagtccattccacaggtttttatcgcaacaaagctaaaaatattcgtggtgct
tgcgaaatgattatgagggactttgatggtcgagtccccaacaccatggaaaagctactc
aaactgccaggggtagctcgcaaaactgccaatgtggtcttagcccatgcttatgggatc
aatgcaggcgtgaccgttgacacccatgtaaagcgccttacaaagaaattgggactaacc
aaatttgaggaaccgatcaaggtcgaacgcgatctcatgtcactactgccccaacgggat
tgggaaaattggtcaatcaggattatttatcacggacgggcggtttgtaatgcccgtaaa
cctgcgtgcgatcgctgtgaacttgccgatttatgcccatctgcttctgtaaagtaa
DBGET
integrated database retrieval system
