Pseudomonas sp. TCU-HL1: THL1_1122
Help
Entry
THL1_1122 CDS
T05373
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset00300
Lysine biosynthesis
pset00550
Peptidoglycan biosynthesis
pset01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
THL1_1122
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THL1_1122
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pset01011
]
THL1_1122
Enzymes [BR:
pset01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
THL1_1122
Peptidoglycan biosynthesis and degradation proteins [BR:
pset01011
]
Precursor biosynthesis
Amino acid ligase
THL1_1122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N
CBP_BcsQ
Antitox_RHH
Motif
Other DBs
NCBI-ProteinID:
AOE83670
UniProt:
A0A1B3E2C5
LinkDB
All DBs
Position
1209597..1211060
Genome browser
AA seq
487 aa
AA seq
DB search
MPMPLNQLLPQAQGATLIRELTLDSRKVRPGDLFLAVPGAQHDGRAHIADAVSRGAVAVA
YESTNAQVTEVVGAELIPIKGLAGQLSAIAGRFYGEPSRALRLVGVTGTNGKTSVSQLLA
QALDQLGERCGIVGTLGTGFCGELESGRHTTPDPLAVQATLANLKQAGARAVAMEVSSHG
LEQGRVAALDFDVAVFTNLSRDHLDFHGSMEAYAVAKAKLFSWPNLRARVINLDDELGRQ
LAAEQRESRLFSYSLEDADAFLYCREARFDDHGVRAQLVTPQGEGLLRSPLLGRFNLSNL
LAVVGALLAMDYPLDEVLHVLPSLQGPVGRMQRLGGGEKPLVVVDYAHTPDALEKVLQAL
RPHVTGRLLCLFGCGGDRDRGKRPLMAAVAERLADRVLVTDDNPRSEDPAQIFADIRTGF
DVADNAEFVAGRGLAIAQLISSAAAADVVLLAGKGHEDYQEIAGERHPFSDLDEAAKALD
AWEVPHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgccactgaaccagctactgccccaggcgcaaggcgccaccttgattcgtgaa
ctgaccctggacagtcgcaaggtgcgtccgggcgacttgttcctggccgtgcccggtgcc
cagcacgacggccgtgcacacatcgctgacgccgtctctcgtggcgccgtcgctgtggct
tatgagtcgaccaatgcccaggtgactgaagtcgtgggtgccgaactgatcccgatcaag
gggttggccggccaactgtcggcaattgcgggccgtttctacggtgagccgagtcgcgcg
ctgcgcctggtgggggtcaccggtaccaatggcaagaccagtgtcagccagctgctggct
caggcgcttgaccagttgggcgagcgttgcgggattgtcggcaccctggggaccggcttc
tgtggcgagttggaaagcggtcgccataccacgcctgatcccctggccgtgcaggccacc
ctggcgaatctgaagcaggctggtgcccgcgccgtagccatggaagtgtcctcccacggc
cttgagcagggccgtgttgccgcgctggatttcgatgttgcggtgtttaccaatctgtct
cgcgaccacctggacttccacggttccatggaggcctacgcagtggccaaggccaagctg
ttcagctggcccaacctgcgcgcgcgggtgatcaatctcgatgacgagctcggtcgccaa
ctggctgctgagcagcgcgagtcccgccttttcagttacagcctggaagacgccgacgca
ttcctttactgccgtgaagcccggttcgatgatcacggagtacgtgcccaactggtcact
ccgcaaggcgaaggcctgctgcgtagcccgctgctgggccgattcaacctgagcaacctg
ttggccgtggtcggtgcgctgctggccatggactatccgctggatgaagtgctgcatgtc
ctgccgtcgctgcaaggcccggtcggccgcatgcagcgcctgggcggcggcgagaagccc
ctggtggtggtggactatgcccacacgccggacgcgctggagaaagtcctgcaggcattg
cgtccccatgtcaccggtcgcctcctctgcctgttcggctgtggtggtgaccgggatcgc
ggcaagcgtccgctgatggccgcggttgccgagcgcctggcggatcgcgtcctggtaacc
gatgacaacccgcgcagtgaagacccggcgcagatcttcgccgatatccgtacgggtttc
gacgtggcggacaacgcggagttcgtcgcgggccgcggcctggccatcgcccaactgatc
agttccgctgctgctgctgatgtagtgctgctggctggcaaaggccatgaggattaccag
gaaatcgctggcgagcgccatcccttctcggatctggatgaagcggccaaggcgctggat
gcctgggaggtgccccatgcttaa
DBGET
integrated database retrieval system
