Pseudomonas sp. TCU-HL1: THL1_2012
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Entry
THL1_2012 CDS
T05373
Name
(GenBank) 3-isopropylmalate dehydratase
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset00290
Valine, leucine and isoleucine biosynthesis
pset00660
C5-Branched dibasic acid metabolism
pset01100
Metabolic pathways
pset01110
Biosynthesis of secondary metabolites
pset01210
2-Oxocarboxylic acid metabolism
pset01230
Biosynthesis of amino acids
Module
pset_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
THL1_2012
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
THL1_2012
Enzymes [BR:
pset01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
THL1_2012
4.2.1.35 (R)-2-methylmalate dehydratase
THL1_2012
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Motif
Pfam:
Aconitase_C
LeuD
LeuD_C
DUF7782
Motif
Other DBs
NCBI-ProteinID:
AOE84560
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Position
2166869..2167513
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AA seq
214 aa
AA seq
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MKAFTQHTGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPNQDNSQ
RPVNKDFVLNFPRYEGASVLLARENFGCGSSREHAPWALDEYGFRAIIAPSYADIFFNNS
FKNGLLPIILKDEEVDELFQQCEASEGYQLTVDLAAQTVTRPDGKQYSFEVDAFRKHCLL
NGLDDIGLTLQDAEAIRSFEDKYRQGSPWLFRDA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctttacccaacacaccggtctcgtcgctccgctggatcgcgccaacgtcgat
accgaccagatcattccgaagcagttcctcaagtcgatcaaacgtaccggcttcggcccc
aacctgttcgacgagtggcgctacctggacgtcggccagccgaaccaggacaactcccag
cgtccggtgaacaaggacttcgtgctgaacttcccgcgctacgagggcgccagcgtgctc
ctggcccgtgagaacttcggctgtggctcctctcgtgagcacgcgccgtgggccctggac
gaatatggcttccgcgccatcatcgcgccgagctacgccgacatcttcttcaacaacagc
ttcaagaacggcctgttgccgatcatcctgaaggacgaggaagtcgacgaactcttccag
cagtgcgaagccagcgagggctaccaactgaccgtcgatctggcggcgcagaccgtgacc
cgtcccgacggcaagcaatacagcttcgaagtcgacgctttccgcaaacactgcctgctc
aacggtctcgacgatatcggcctgaccctgcaggacgcggaggcgatcaggtcctttgaa
gacaagtaccgtcagggcagtccctggctgttccgcgacgcctga
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