Pseudomonas sp. TCU-HL1: THL1_5056
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Entry
THL1_5056 CDS
T05373
Name
(GenBank) RND-type multidrug efflux pump membrane fusion protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset01501
beta-Lactam resistance
pset01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THL1_5056
01503 Cationic antimicrobial peptide (CAMP) resistance
THL1_5056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pset03036
]
THL1_5056
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pset02000
]
THL1_5056
01504 Antimicrobial resistance genes [BR:
pset01504
]
THL1_5056
Chromosome and associated proteins [BR:
pset03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
THL1_5056
Transporters [BR:
pset02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
THL1_5056
Antimicrobial resistance genes [BR:
pset01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
THL1_5056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD_3
OEP
Biotin_lipoyl
DUF1496
Motif
Other DBs
NCBI-ProteinID:
AOE87604
UniProt:
A0A1B3EDN0
LinkDB
All DBs
Position
complement(5463178..5464344)
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AA seq
388 aa
AA seq
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MPLARSLPISLALFAASASFTGLAGAADGAPSAPEVVVETAKAAPLPLILEYAGRTAGYR
EVEVRAQVSGILQQRTYTEGSRVKQGQVLFRIDPRTYEAALARAKGALAQEQARYRQTDR
DLKRTRELQKKGYASESELDNAISNFEQSKANVEAAQAEVKARQIDLDYTTVEAPISGMT
SKETRSEGSLVVATDPNSSLLTQLTQLDPIYVNFAYPDTEAERLREGVKVGKVELPPDGL
LSAELKFGDGSTYPLAGRVDFTDSFVNTGTGTVSARAVVPNPEQKLLPGMFVRVLVKGFT
RPQAITLPERALAQGPRGTFVYVVDKDGMARVRQVKTGDTRDGRWVIESGVSAGDQVIVE
GLPKVRPDSPVKAVEASKAPAEQSAKQS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgctcgcagtctgcccatcagccttgctcttttcgccgcaagcgccagtttc
accggccttgctggtgccgctgacggtgctccgtcggcccctgaggtagtggtggagacc
gccaaggcagccccgctgccactgatcctggaatacgccgggcgcactgcgggctatcgc
gaggtggaggtccgggcccaggtcagcgggatactccagcagcgtacctacaccgagggc
agccgggtgaagcagggccaggtgctgttccgcatcgatccgcgtacctacgaggcggcc
ctggctcgggccaagggcgcgctggcccaggaacaggcgcgctaccgccagaccgaccgt
gatctgaagcgtacccgcgagttgcagaagaagggctacgccagcgagagcgagctggat
aacgcgatttccaacttcgagcagagcaaggccaatgtcgaagccgcccaggccgaagtg
aaagcccggcagatcgacctcgactacaccaccgtcgaggcgcccatctccggcatgacc
agcaaggaaacccgctccgagggcagcctggtggtggccaccgaccccaactccagcttg
ctcacccaactgacccagctagaccccatctacgtcaacttcgcctacccggacaccgag
gccgagcgtctgcgcgagggggtgaaggtcggcaaggtcgagttgccgcccgatggcctg
ctcagcgcagagctgaagttcggtgatggctccacctatccgctggcgggccgggtggac
ttcaccgacagcttcgtcaataccggcaccggcaccgtcagtgctcgcgccgtggtgccc
aaccccgaacagaagctgctgcccggcatgttcgttcgcgtcctggtgaagggcttcact
cgtccgcaggccatcaccctgccggaacgcgccctggcccaggggccgcgcggcaccttc
gtctatgtggtcgacaaggacggtatggcgcgggtgcgccaggtgaaaaccggtgatacc
cgcgatggccgctgggtcatcgagtccggcgtcagcgcgggcgaccaggtgatagtcgaa
ggcctgcccaaggtgcgccccgactcgccggtgaaggcggtggaggccagcaaggcaccc
gctgaacaatccgctaaacaatcgtaa
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