Paracoccus seriniphilus: JHW44_03890
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Entry
JHW44_03890 CDS
T08801
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psew
Paracoccus seriniphilus
Pathway
psew01501
beta-Lactam resistance
psew01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JHW44_03890
01503 Cationic antimicrobial peptide (CAMP) resistance
JHW44_03890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psew02000
]
JHW44_03890
01504 Antimicrobial resistance genes [BR:
psew01504
]
JHW44_03890
Transporters [BR:
psew02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JHW44_03890
Antimicrobial resistance genes [BR:
psew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JHW44_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ZT_dimer
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WCR14607
LinkDB
All DBs
Position
788824..791880
Genome browser
AA seq
1018 aa
AA seq
DB search
MNMSTWSIRHPVPPIALFMVLLVVGLFSFGRLPVTAMPNIDLPIVSVSISQPGAAPSELI
SQVVQPVEDSIASVTGVRHMTSTATDSSASITIEFELETDSDRAVNDVKDAVSNVRAELP
ESINEPIVQRVDVTGFPILTYAVSDPTQSIEGLSKFVDDVIGRELSNVPGVARTSRIGGA
ERQIKVDLDPDRLLAHGLTAADVSGQLRNKNIDMGGGRGDLAGTEYSIRTLGSADTVEQL
AATPIAIGTGRTIRLDQLGTVVDGASDERTFALLDAQPVVAFGVYRGSGESDLAAGDATK
KRLEELRQEYPNTRITLIDDSTTYTAASYHSAMETLYEGAALAVVVVFLFLRNWRATLIA
AVALPLSIIPTFFVMHWLGFTLNGISLLGITLVTGILVDDAIVEIENIVRHIGMGVPPYE
ASEEAANEIGLTVIAISFSIVAVFAPVSFMGGIPGQYFKQFGLTVAVSVLFSLLVARIIT
PMLAAYFMRGTAHAETPEDGFVMARLMALCRWTLRHRGLTLLAGLGIFAGSIYSATLLPT
EFIPASDVGRSQIEVELPPGSTISETQDATRRLTQEIAHTPEVKSVFAYGDGVDVTTARV
MINYGKKETRDRSQFALEAELKERLSLTPDMRINFQNENGQNDLSISVLGETDEGAALAA
ERLATRMSRLPTLEGVTSSASLQRPEIQIYPRSDVAAQLGVSASAMATTLRIATLGDTEA
NLAKFNTGDEQLPIVVRLNEAARTDLMQVQNLRVPSSAGQIPLGTVAEVRLSAGATEIGR
YDRQYQTSVSANLADGALLGPVSAQVTQLQDEIEMPPGTRIQAAGDAEIMGEVFAAFGTA
MGAGVMLVYVVLVLLFHNFVTPITILLSLPLAIGGAILALFITGNSISMAVVIGFLMLMG
IVTKNSIMLVEFALTSMAEGTPKREAILDAVHKRARPIVMTTIAMSAGMIPSAMATGEGG
EFRAPMAIAVIGGLILSTVLSLLFVPSLFSMVHGAQGGVFGWLGKRIGLNKARDIPAQ
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtccacctggtcgatcaggcatcccgttccaccgattgccctgttcatggtg
ctgcttgtggtcgggctgttcagctttggccgcctgccggtcacggccatgcccaatatc
gacctgccgattgtcagcgtcagcatctcgcagcccggcgcggcaccttcggaactgatc
agccaggtcgtgcagccggtcgaggacagcattgcctcggttaccggggtgcgtcacatg
acctcgaccgccacggacagcagcgccagcatcaccatcgaattcgaactggaaaccgac
agcgaccgggcggtgaatgacgtcaaggacgcggtgtcgaatgtgcgggccgagctgcct
gaaagcatcaacgagcccatcgtgcaacgcgtcgatgtgaccggttttccgatcctgacc
tatgccgtcagcgatccgacacaaagcatcgagggcctgtcgaaattcgtcgatgacgtg
atcgggcgtgaattgtccaatgtgcccggcgtggccagaacctcgcgcattggcggggcc
gagcgtcagatcaaggttgatctggaccccgaccggcttctggcgcatggcctgaccgca
gcggatgtttcgggtcagttgcgcaacaagaatatcgacatgggtgggggtcgtggcgat
ctggccgggaccgaatattcgatccgcacccttggctcggccgatacggtcgagcaactg
gccgccacgccgattgcgattggcaccggccggaccatccgtctggaccagttgggaacc
gtcgtcgatggtgccagtgacgaacgcacctttgccctgctggatgcgcagccggtggtg
gccttcggggtctatcgcggctcgggtgaatccgatctggccgccggggatgcaaccaag
aagcgtctggaagaactgcgtcaggaatatcccaatacccgcatcacgttgattgacgac
agcacgacctataccgccgccagctatcacagcgcgatggagaccctttatgaaggtgcg
gcgctggccgtggtggtggtctttctgttcctgcgcaactggcgggccacgctgatcgcg
gcggtggcgttgcccctgtcgatcattccgacctttttcgtgatgcactggctgggcttt
actttgaatggcatcagcctgctgggtatcacgctggttaccggcatccttgtcgatgat
gccatcgtggaaatcgagaatatcgtccgccatatcggcatgggggttcccccctatgag
gccagcgaagaggctgccaatgaaatcggtctgacggtcatcgcgatcagcttctcgatt
gtcgcggtatttgcgccggtcagcttcatgggcgggattccgggacagtatttcaagcaa
ttcgggctgacggtcgccgtgtccgtgctgttttcgctgctggtcgcgcggatcatcacg
cccatgctggccgcctatttcatgcgcggtaccgcccatgcggaaacgcccgaagacggc
tttgtgatggcccgtttgatggcgttgtgccgctggacgctgcgccatcgcgggctgacc
ctgctggcggggctggggatcttcgcgggttcgatctattcggcgaccctgctgccgact
gagttcattccggcctcggacgtcgggcgcagccagatcgaggtggaattgccacccggt
tcgacgatttcggaaacccaggatgcaacccgccgtttgacgcaagagatcgcgcatacg
cccgaggtcaaatcggtctttgcctatggcgatggcgtcgatgtcaccaccgcgcgggtg
atgatcaattacggcaagaaggaaacccgcgaccgatcgcaattcgcgctggaggctgag
ctgaaggagcggctgtccctgacgcccgatatgcggatcaatttccagaatgagaacggc
cagaatgacctgtcaatcagcgttttgggcgaaacggacgaaggcgctgcccttgcggcc
gagcgtctggccacaaggatgtcgcgcttgccgacgctggagggcgtgacctcttcggcc
agcctgcagcggccagaaatccagatctatccacgttccgatgtggctgcacaactgggc
gtcagcgccagcgccatggccacgaccctgcggattgccacgctgggcgataccgaggca
aatctggccaaattcaataccggcgacgaacagctgcccattgtcgtgcggctgaacgag
gccgcgcggaccgatctgatgcaggtgcagaacctgcgggtgcccagttcggcgggccag
atcccgctggggacggtcgccgaggtcaggctgtcggccggcgccaccgagatcgggcgc
tatgatcgccagtatcagaccagcgtcagcgcaaatctggccgacggagccttgctgggg
ccggtcagtgcgcaggtcacgcaattgcaggatgagatcgagatgccgccgggtacgcgc
attcaggcggcgggtgacgctgaaatcatgggcgaggtcttcgcggccttcgggactgcg
atgggggccggcgtgatgctggtctatgtcgtgctggtgttgctctttcataactttgtc
accccgatcacgattcttctgtcgctgcccctggcgattggcggggcgatccttgcgttg
ttcatcaccggcaattcgatcagcatggctgttgtcatcggctttctgatgctgatgggg
atcgtgaccaagaactcgatcatgctggtcgaatttgccctgacctcgatggccgagggc
acaccgaagcgcgaggcgatccttgatgccgtgcacaagcgggcgcgccccatcgtgatg
acaaccatcgcgatgagcgcgggcatgattccctcggccatggcaacgggcgaggggggc
gagttccgcgcccccatggccattgcggtgatcggggggctgatcctgtctaccgtgctg
tcactgctgttcgtgccatcgctgttttcgatggtgcatggcgcgcagggcggtgtcttt
ggctggcttggcaagcgaattgggctgaacaaggcgcgcgatatcccggcgcaatag
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