Paracoccus seriniphilus: JHW44_04505
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Entry
JHW44_04505 CDS
T08801
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psew
Paracoccus seriniphilus
Pathway
psew01501
beta-Lactam resistance
psew01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JHW44_04505
01503 Cationic antimicrobial peptide (CAMP) resistance
JHW44_04505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psew02000
]
JHW44_04505
01504 Antimicrobial resistance genes [BR:
psew01504
]
JHW44_04505
Transporters [BR:
psew02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JHW44_04505
Antimicrobial resistance genes [BR:
psew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JHW44_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
WCR14716
LinkDB
All DBs
Position
914882..918007
Genome browser
AA seq
1041 aa
AA seq
DB search
MARFFIDRPVFAWVISIIIMGIGVISILTLPVAQYPQIAPPSVSVNATYPGASAETITNT
VTQVIEQQMTGLDGLRYMSSSATSSGTSSTTLTFETGTDVDIAQVQVQNKLSQATALLPE
EVQRQGVTVEKSSAGFLMVIGLIGDENYDQTDLSDYMVTNLVDDLSRVEGVGSVQVFGSK
YAMRIWLDPSKLASYEIAPSDVVAAVSSQNTQISAGAFGSRPTVEGQQLNATVTAQSLLS
SPEDFRQIVLRAQEDGGLVLLQDVARVEVGSESYAAEATYNGRPAAGMAISLAPGANALD
TSERIKERMSEFSEFFPEGVEYVIPFDTTPFVEISIEEVVHTLIEAIVLVFIVMYIFLQS
WRATLIPTLAVPIVLLGTFGIMAAFGFSINTLTMLAMVLAIGLLVDDAIVVVENVERLME
EEGLEPREATRKSMGQITGALVGIALVLSAVFVPMAFFGGSTGVIYQQFAITIVSAMGLS
VVVAMTLTPALCASLLRPAHGEKRGFFGLFNRGFDRTTRGYTGTVNWMVRRPLRMLLVYG
ALGAMMVMLFLRTPEGFLPDEDQGIMFVLVNAPTGATSERTNAVLDQVRSYMLEQEDEIV
DSVFAVSGFSFVGQGQNVGMAFVRLKDWDERLEPAQGVQALAGRAFGAFSQIRDALVFPI
VPPSVIELGNVSGFDFYLQARAGQSHEQLLEARNQLLGMAAQSPLIAQVRPSGLEDAAQF
RLDIDWRKAGAMGVTATDVANLLQIAWTGSYVNDFIDRGRIKRVYVQGEADARSGPSDLD
RWRVRNASGGLVPFSNFAEGNWTYGPQGLNRYNGLPSMQIQGSPAPGVSSGEAMAEIERL
VSQLPGGFYPAWTGLSLEERESGDQTTLLYSLSLMAVFLCLAALYESWSIPFAVILVMPI
GVLGALGGAWVGQFDNGVFFQVGLLTVIGLTGKNAILIVEFAREQSVAGVPLYKAVVEAA
RQRFRPIMMTSIAFTLGVLPLALSSGAGANGRNTIGTTVIGGTLAASALGILFAPLFYVL
MRRLLGRKDELEGNSTTPAAE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcttcttcatcgatcgaccggtcttcgcttgggtgatctcgatcatcatcatg
ggaatcggggtcatttcgatcctgaccctgccggtggcgcaatatccgcagatcgcgccg
ccctcggtgtcggtcaatgcgacctatccgggcgcttcggccgagacgatcaccaatacg
gtgacgcaggtcatcgaacagcagatgaccgggctggacgggctgcgctacatgtcctcc
agcgccacctcatcggggacatcctcgacgacgctgaccttcgaaaccggcacggatgtc
gacatcgcgcaggtccaggttcagaacaagctgtctcaggcgaccgccctgctgcccgag
gaggtgcaaaggcagggcgtgacggtcgagaagtcatccgctggcttcctgatggtgatc
ggcctgatcggcgacgagaattacgaccagaccgacctgtcggactatatggtaaccaac
cttgtcgatgatctcagccgcgtcgaaggcgttggcagcgttcaggtctttggctcgaaa
tacgccatgcgtatctggctggatccgtccaagctggcttcatatgaaatcgcgccctcg
gatgtggttgctgccgtgtcctcgcagaacacccagatttcagcaggcgcattcggcagc
cgtccgacggtcgaaggccagcagctgaacgccacggtgaccgcacagtcgctgttgtcc
tcgccggaagatttccgccagatcgtgctgcgtgcgcaagaggatggcggcctggtcctg
ctgcaggatgtcgcgcgcgtcgaggtcgggtcggaaagctatgccgccgaggccacctac
aatggccggcctgcggcgggcatggcgatcagccttgccccgggggcgaatgcgctggat
acctccgagcgcatcaaggagcgcatgtcggaattctcggaattcttccccgagggggtc
gaatacgtcattcccttcgacacgaccccctttgtcgaaatctcgatcgaagaggtggtc
cacacgctgatcgaagccatcgtgctggtcttcatcgtgatgtatatcttcctgcaaagc
tggcgcgcgacgctgattccgacgctggccgtgcccatcgttctgctgggcaccttcggc
atcatggcggcctttggcttcagcatcaacacgctgaccatgctggccatggttctggcc
atcggtctgctggtggatgacgcgatcgtcgtggtcgaaaacgtcgagcgcctgatggaa
gaagaggggctggaaccgcgcgaggccacccgcaaatccatggggcagattaccggcgcc
cttgtcgggatcgcgctggttctgtcggccgtgttcgtgccgatggcgttcttcggcgga
tcgaccggggtgatctatcagcagttcgcgattaccatcgtgtcggccatggggctgtct
gtggtcgtcgcgatgaccctgacaccggcgctttgcgcatcgctgctgcgcccggcccat
ggcgagaaacgcggctttttcggcctgttcaaccgggggttcgaccgcacgacccgcggc
tataccggcacggtgaactggatggtgcgccgtccactgcgcatgttgctggtctatggc
gctcttggcgcgatgatggtgatgcttttcctgcgcacgcccgaggggttcctgcccgat
gaggatcagggcatcatgttcgttctggtcaacgcaccgacaggggcaaccagcgagcgc
acgaatgccgtcctggatcaggtgcgcagctatatgctggagcaggaagacgaaatcgtg
gattcggtctttgccgtgtcgggattcagctttgtcggacaggggcagaatgtcggcatg
gccttcgtgcgcctgaaggactgggatgagcggcttgaaccggcgcagggcgtgcaggcg
ctggcgggacgtgcctttggggccttcagccagattcgtgacgcgctggtcttcccgatc
gtgccgccttcggtgatcgaattaggcaatgtgtcgggatttgacttctatctgcaggcg
cgtgccggccagagccatgaacaactgcttgaggcgcgcaaccagctgctggggatggcc
gcgcaaagcccgctgatcgcgcaggtccggccttcggggctggaggatgcggcgcagttc
cgactggacatcgactggcgcaaggcgggtgccatgggcgtgacggccaccgatgtggcc
aatctcttgcagatcgcctggaccggatcctatgtgaacgacttcatcgaccgtggccgc
atcaagcgcgtctacgtgcagggcgaggccgacgcgcgttccggtcccagcgatctggac
agatggcgcgtgcgcaatgccagtggcgggctggtgcccttttcgaatttcgccgagggc
aactggacctatggcccgcaggggctgaaccgctacaacggcctgccttcgatgcaaatc
cagggcagccccgcgccgggtgtcagctcgggtgaagccatggctgaaatcgaacgtctg
gtcagccagttgcccggcggcttctatccggcatggaccggcctgtcgctggaagaacgc
gaatccggtgatcagaccaccttgctttacagcctgtcattgatggcggtgttcctctgc
ctggccgcgctctatgaaagctggtcgatccccttcgcggtcatccttgtcatgcccatc
ggggtgctgggcgcgctcggcggagcctgggtggggcagttcgacaatggcgtcttcttc
caggtcggcttgctgacggtgatcggcctgaccggcaagaacgcgattctgatcgtcgaa
ttcgcccgcgagcaatccgtggccggggttccgctgtacaaggcggtggtcgaggccgcg
cgtcagcgtttccgtccgatcatgatgacctcgatcgcctttaccctgggggttcttccc
ctggcgctgtccagcggggcgggggccaacggccgcaataccatcggcaccacggtgatc
ggcgggacattggccgcctccgcgctggggatcctgttcgctccgctgttctatgtgctg
atgcgccggctgctggggcgcaaggacgagctggaaggcaattcgaccaccccggctgcc
gagtga
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integrated database retrieval system
