Polypterus senegalus (gray bichir): 120514292
Help
Entry
120514292 CDS
T08668
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04514
Cell adhesion molecule (CAM) interaction
psex04517
IgSF CAM signaling
psex04520
Adherens junction
psex04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120514292 (ptprfa)
04517 IgSF CAM signaling
120514292 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120514292 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120514292 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120514292 (ptprfa)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120514292 (ptprfa)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120514292 (ptprfa)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120514292 (ptprfa)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
Type II RPTP family
120514292 (ptprfa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Ig_2
Fn3_ROS1
ig
fn3_2
Fn3_PBP1
Ig_VEGFR-1-like_5th
Interfer-bind
Tc-R-P
PTP-SAK
fn3_SORL1
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
Fn3_PTPRU
Fn3_R-PTP-O
PTP-NADK
YxzE
Insulin_TMD
ICAM_N
Motif
Other DBs
NCBI-GeneID:
120514292
NCBI-ProteinID:
XP_039590536
LinkDB
All DBs
Position
14:69897260..70493531
Genome browser
AA seq
1912 aa
AA seq
DB search
MVPICCPAALFVPAMAALGCLVLSTAADSLPNFIKTPEDQIGISGGVASFVCQAAGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSIGEINTSAKL
TVLEEDQIPHGFPVIDMGPQLKVVEKTRTATMLCAASGNPDPEISWFKDFLPVDTASSHG
RIKQLRSGALQIENSEESDQGKYECVATNNAGTRYSAPANLYVRVRRVPPRFSIPPTNHE
VMPGGSVNLTCVAVGAPMPYVKWMSGVVELTKEDEMPVGRNVLELNNIRESANYTCVAIS
SLGMIEASAQITVKALPKPPSVPIVTETTATSVTLTWDSGNPDPVSYYVIQYKAKSSDGG
YQEADGVATTRYSIGGLSPFSDYEFRVLAVNNIGRGPPSDIVDARTGEQAPSSPPLRVQA
RMLSASTILVQWEPPEEPNGQIRGYRVYYTVDMQLPLNAWQKHNTDDSRLTTISGLSTGS
TYSIRVLGFTSVGDGPPSDVLQIKAQQGVPAQPSNFQAEAESDTRIMLSWLLPAQEKITK
YELAYWESDSTNQQQHLTLDPTDSYAVEGLKPDTLYKFILAACSDIGVGVYTQPIEARTA
QSTPSAPPQDVQGVSLSSTSIKVSWMAPPAGSRHGAIVQYTVAYQAVNGEDNERHEVPGI
PAEASSYVLESLEKWTEYKVWVRAHTDVGPGPESPVVLIRTDEDVPSAPPRKVEAEAINS
TSIRVTWKAPLSSKQHGLIRGYQVTYSRLENGEPRGQPHIKDVMLPEAQWKVEEPTDYEA
VIIGLVPETTYSITIAAYTTKGDGARSKAKVVTTTGAVPGKPVMIISATALNTALIQWQP
PKEMIGELTGYRLQYKRLEEDKYQVIDLRKTDDHYTVTGLHKGVTYNFKLSAKNRAGIGE
EYVKEITIAEDIPSGFPQNLRVVGLTTSTTELAWEPPVLSERNGKITQYSIVYRDINSQQ
NNTNITSQTHITLTGLRSDTTYDIRVQAFTSKGAGPLSPSIQSRTMPVEPVFAKSFRVKA
VMKTSVLLTWEVPESYKSQVPFKILYNGQSVEVQGYLKRRLITKLQPDTEYSFVLMSRGN
SAGGLQQVVSIRTAPDVLTSKPGKFSKSAGEDGKLSIDLPKVQTKAPVRWYYIVVVPEAS
KQWENPEEMDIDELLESSQNPGMRRQRRQIESLKPYIAAKLDSLPPTFILGDEKNYNGFY
NKPLPGDQKYLFFVLAALEGRDTETFAASPYSDPVQVEMYKEIAKPQEDPEMLWVMGPVL
AVILIIIIVIAILLFKSKQERKRASPSTKDDHSGGVKDSLLSHSSDPVEMRRLNYQTPGP
SAPSCPNISSMREHPPISVTDLADHIERLKANDGLRFSQEYESIDPGQQFTWENSNLEVN
KPKNRYANVIAYDHSRVILTSVDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFW
RMVWEQRTSTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTTLDTVELATYSVRTFAL
YKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCSAGVGRT
GCFIVIDAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEV
PARNLYAHIQKLTQVPPAETVTSMELEFKRLANSKAHTSRFITANLPCNKFKNRLVNIMP
FESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIV
VMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTI
RQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV
LERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctatttgctgtccagcagcactatttgtgccagcaatggcagcactaggctgc
ctggtactatccacagcagcagacagcttgccaaactttataaaaaccccagaggaccaa
attggaatttcaggtggggtggcatcttttgtatgccaggctgcaggagagccaaaaccc
agaatcacgtggatgaaaaaaggaaagaaagtgagctctcaacgttttgaggtcatcgag
tttgatgatggatcagggtctgtcttaagaatccagccacttcggactcatagggatgag
gcaatatacgaatgtacagccacaaacagcattggggaaatcaataccagtgccaaatta
acagtcctagaagaggatcagatacctcatggctttccagtaatagacatgggaccccag
ctgaaggtggtggagaagacacgcactgctaccatgttatgtgcagcaagtggcaatcca
gacccagaaatttcttggtttaaggatttcttgcccgtggacacagcgagcagccatggg
cgtatcaagcagctccgctcaggtgcccttcagatagaaaatagtgaagaatctgaccag
ggcaagtatgagtgtgtggctaccaacaatgcaggaactcgttattctgcccctgccaac
ctctatgtgcgagttcgccgtgttcctcctcgcttctccattcctcccactaaccatgag
gttatgccagggggcagtgtcaacctaacttgtgtggctgtgggggcaccaatgccatat
gtcaaatggatgagtggagttgtggagttgacgaaggaggacgaaatgcctgtgggtcgc
aatgttctggagctcaacaacatccgtgaatctgccaactatacctgtgtggccatttcc
tccttggggatgattgaagcctctgcacaaattacagtcaaggcattgccaaaaccacca
tcagtacccatagttacagagactacagctactagtgtcactttgacctgggactctgga
aatccagaccctgtgtcctactatgttatccaatacaaggctaagtcttcagatggaggc
taccaagaagcagacggagtggccactacaagatacagtattggaggtcttagcccattc
tcagactatgaatttcgggtactagcagtcaataatattggaaggggacctccgagtgac
atagtggacgctcgcaccggtgaacaggctccctcctctcctcctctacgggtgcaggct
cgtatgctaagtgctagcacaatacttgtgcagtgggagcctccagaagagccaaatggg
caaattcgaggatatcgtgtctattatactgttgacatgcagttaccattgaatgcttgg
cagaaacataacacagatgacagtcgccttaccaccatctcaggcctctctacaggctcc
acttacagcatcagagttcttggcttcacttctgtgggtgatggaccaccttctgatgtc
cttcaaattaaagcccaacaaggggttcctgctcaaccttcaaattttcaggctgaggca
gagtcagatactaggattatgctgagctggttacttccagcccaagagaagataaccaaa
tatgagttggcttattgggaaagtgattccacaaaccagcagcaacatttgactcttgat
cccactgattcctatgctgtagaagggctgaagccagacactctttataagttcattctt
gctgcttgttcagatatcggtgtgggagtgtatacgcagcctatagaggcccgaactgca
caatctaccccctctgcccctcctcaagatgtgcaaggtgtcagtctgagctccaccagc
atcaaggtgagttggatggctcctccagctgggagccgccatggagccattgtccagtac
accgtcgcttaccaagctgtgaatggggaggacaacgagaggcatgaggtgcctggaatc
ccagctgaggcctctagttatgtcctggagagcctggagaagtggacagaatataaggtg
tgggtgagggcccacaccgacgttgggcctggaccagaaagccccgtggtgcttattcga
accgacgaagatgtgcccagcgcaccaccaagaaaagtagaagccgaagctatcaactca
acatccattcgtgtcacatggaaggcacccttatcatccaaacaacatgggctgattcgg
ggttaccaggtcacctactcacgacttgaaaatggcgaaccacgtggacagccccacatt
aaggatgtcatgctaccagaagcacagtggaaagttgaggaaccaacggactatgaggct
gtaataattggactggtcccagaaaccacctactcaattacaatagcggcatacactacc
aaaggtgatggggctcgcagtaaggccaaggtggtcactactacaggagctgttccagga
aaacctgtcatgattatcagtgccactgcactgaacacagctttaatccaatggcaacca
cctaaggagatgattggggagcttactggctatcggctacagtacaagcgcttagaagag
gacaagtatcaagttattgaccttaggaagacagatgaccactacacagtcacagggctc
cacaaaggggtgacctataatttcaaactgtcagcaaagaaccgggcaggaataggagaa
gagtatgtgaaggaaataaccattgcagaagatattcccagtggattccctcaaaattta
cgagtagttggcttgaccacctcaacaacggagcttgcatgggagcctcctgtcctgtct
gaaagaaatggcaaaatcacacagtacagcattgtttatcgggatattaacagtcagcag
aacaacaccaatataacatcacaaacccacatcacactcacgggcctgagatctgacacc
acatacgatatccgtgttcaagctttcaccagcaaaggagccggaccccttagccctagc
atccagagccgaacaatgcctgtggaaccagtgtttgccaagagcttccgagtgaaagca
gtgatgaaaacatcagtattattgacttgggaagtgcctgaatcatacaagtctcaagtg
ccttttaagatactttataatggacagagtgttgaggttcagggatatttaaagcgaagg
ctgattacaaaattgcagcctgacaccgagtattcctttgttctgatgagccgtgggaac
agtgctggtggacttcagcaggtggtgtctattcggactgctccagatgtcttaacgtct
aagcctggcaagttcagtaagagtgcgggggaagatggaaaattatctattgaccttccc
aaagtccagaccaaagcacctgtcagatggtattatattgtggtggttccagaagcttcc
aagcagtgggaaaatccagaggaaatggatatagatgaactgttagaatcaagtcaaaac
ccaggaatgaggcgtcagaggagacaaattgaaagcctaaaaccttatattgctgctaaa
ctggattctctgcctccaaccttcatactcggcgatgaaaagaactacaacggcttctac
aacaagccacttcctggagatcagaaatacctctttttcgtcctagcagctctggaaggc
cgagatactgaaacctttgctgcaagcccctattcagaccctgttcaggttgaaatgtac
aaagaaattgcaaaaccgcaggaagatcccgaaatgctgtgggtgatgggacctgtcctt
gctgtgattctgatcatcatcattgtcatcgcaatcttgttattcaaaagcaaacaagaa
aggaaacgtgcttcgccatccactaaagatgatcactcaggaggtgttaaagattctctg
ctgtctcactcttctgatcctgtggagatgcgtagactaaattatcagactccaggtcca
agtgcccccagttgcccgaacatttcaagcatgagagaacatcctccaatctctgtcaca
gacctcgctgatcacatcgaaaggctgaaagctaatgacgggttacggttttctcaggag
tatgagtccatcgatcctggacagcaattcacttgggagaattcaaatttggaagtcaac
aaaccaaagaaccgctatgcaaatgtcatcgcctatgaccattccagagtcatcctcacc
tctgttgatggcgtaccaggcagtgactatatcaatgccaactacattgatggttaccga
aagcagaatgcctacattgctactcagggtccacttccagagacactcagtgatttctgg
aggatggtttgggagcagcggaccagtactatagtaatgatgacccggctggaagagaag
tccagggtaaagtgtgaccagtactggccaagccgtgggacagaaacttatgggatgatt
caagttactacactggacacagtagaacttgcaacctatagcgtgagaacatttgctctt
tacaagaatggatcaagtgaaaaaagagaggttcgccagttccaattcatggcttggcca
gaccatggagtgcctgaatatccaactcccatcttggccttcctacgaagagtgaaagca
tgcaaccctacagatgctgggccaatggtggtacactgcagtgccggcgttgggcggaca
ggctgcttcattgtgattgatgccatgcttgaacgcatgaagcatgagaagtctgttgac
atctatggccacgtgacttgtatgcgtgctcagaggaattacatggtacaaacagaggac
caatatatctttattcatgaagccctgctggaagcagccacctgcggtaacactgaagtc
ccagcacgtaatctttatgcccatatccagaaactgacccaggtccctccagcagagaca
gtgacctcaatggagctggaattcaaaagactggccaactccaaggcccatacctcaaga
ttcattactgccaatctcccatgcaacaaattcaagaatcggctggtgaacatcatgcca
tttgagtctacccgtgtctgcctgcagccaatcagaggggtggagggctcagattacatc
aatgccagctttatagatggctacaggcaacaaaaggcatacattgccacacagggacca
ttggctgagacgactgaagatttctggcgaatgctgtgggaacacaattccactattgtg
gtgatgctgaccaagcttagagaaatggggagggaaaagtgccatcagtactggcctgca
gagcgatcagctcgatatcagtactttgttgtggatccgatggcagaatacaacatgcca
cagtatattctacgtgaatttaaggtcactgatgccagagatggacaatccagaactatt
cgccagttccagttcaccgattggcctgaacaaggggtaccaaaaactggagaagggttt
atagacttcattggccaagtacacaaaactaaggagcagtttggtcaggatggaccaatc
actgtgcactgcagtgctggtgtgggcagaacaggagtcttcatcaccctgagtattgtg
ctggagagaatgaggtatgaaggggtggtggaccttttccagaccgtaaaaacactgcga
actcagcggccagccatggtgcagacagaggaccaatatcagttgtgctacagggctgcg
ttggagtacctaggaagctttgaccactatgcaacgtaa
DBGET
integrated database retrieval system
