Polypterus senegalus (gray bichir): 120516337
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Entry
120516337 CDS
T08668
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120516337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
psex04050
]
120516337
Cytokine receptors [BR:
psex04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
120516337
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
120516337
NCBI-ProteinID:
XP_039593873
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All DBs
Position
16:2296363..2343314
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AA seq
408 aa
AA seq
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MRGLCCTQVMMLFAVASARDTDIPKYQHRDKVTSVFHTCDQCPPGTFVKQHCNATSKTLC
SPCPEQHYSEHWHWDEQCQYCTAMCKERQNIQQKCNSTHNLVCRCIDGYYLNLEFCVRHK
SCPWGYGVKKLGTAESDTLCEMCPDGYFSNEHSATKPCVKHTDCGELKLRLLMPGSAERD
AICDRNDKVASSQCLSSQYECHADISLCEEAVFRFIASQGLTAYQLEVLMDNLPGKKVDR
KNIERIKQMCNPKQHILYLLKMWMNQNKDQEKIYSIIQDVNECERVISRRVGFQNLTLDH
FNAIINSLPGNKVKESDIQRIVKTCDSKQYVLQLLSLWKIQNGDQDTASGLLQTVKKLKS
HKVPKRLLQGLKRIIKLFNSSAIYRIYQKMFFEIIQGSKCWNSKVFND
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtttgtgttgtacacaagtgatgatgttgtttgctgtggcttctgcacgggat
actgatattccaaaatatcagcacagagacaaagtaacatcagtcttccatacatgtgac
cagtgcccccctggcacctttgttaagcaacattgtaatgcaaccagtaaaacattgtgt
tcaccatgtcctgagcaacactactctgaacactggcactgggatgagcagtgccaatac
tgtacagccatgtgcaaggaaaggcaaaacattcagcaaaagtgcaacagcacgcataac
ctggtgtgcaggtgcatcgacggctactacctgaacctggagttctgtgtgcgacacaag
tcatgtccctgggggtacggagtaaagaagctcggtacagcagaaagtgacaccctttgt
gaaatgtgtcctgatggctacttttccaatgaacattcagcaacaaagccatgtgtgaag
cacacagactgcggggagctgaaactgagactgctaatgcctggatctgctgaacgtgac
gctatatgtgacagaaatgacaaagtggcatcctctcagtgtttgtcttctcagtatgaa
tgccatgcagacatcagtctatgtgaggaggccgtttttcgattcattgcctctcagggg
ctaacggcgtaccagctagaagtcttaatggacaacctccctggcaagaaagtggaccgt
aaaaacattgaaagaattaaacaaatgtgcaaccccaagcaacacatcctttaccttctg
aaaatgtggatgaaccagaataaagatcaggaaaagatttacagcattattcaagatgtg
aatgagtgtgaaagggtcatctcaaggcgtgtaggttttcaaaacctgaccctggaccac
ttcaatgccatcatcaatagcctaccgggaaacaaagtgaaggagagcgacatccaaaga
atcgtgaaaacatgtgactccaagcagtatgtgctgcagctcctcagcctgtggaagatc
cagaatggagaccaggacacggcaagtggcctcttacaaactgtcaaaaagctgaaatcc
cacaaagtgcccaagaggttactccaaggcctgaagaggatcattaagctctttaacagc
tctgccatctatcgaatttatcagaaaatgttctttgaaatcatccagggaagcaaatgc
tggaattccaaagtcttcaacgactag
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