Polypterus senegalus (gray bichir): 120516562
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Entry
120516562 CDS
T08668
Name
(RefSeq) actin, cytoplasmic 2-like isoform X1
KO
K05692
actin beta/gamma 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
psex04145
Phagosome
psex04210
Apoptosis
psex04510
Focal adhesion
psex04520
Adherens junction
psex04530
Tight junction
psex04810
Regulation of actin cytoskeleton
psex04814
Motor proteins
psex04820
Cytoskeleton in muscle cells
psex05100
Bacterial invasion of epithelial cells
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120516562
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120516562
09143 Cell growth and death
04210 Apoptosis
120516562
09144 Cellular community - eukaryotes
04510 Focal adhesion
120516562
04520 Adherens junction
120516562
04530 Tight junction
120516562
09142 Cell motility
04814 Motor proteins
120516562
04820 Cytoskeleton in muscle cells
120516562
04810 Regulation of actin cytoskeleton
120516562
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120516562
05100 Bacterial invasion of epithelial cells
120516562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120516562
03019 Messenger RNA biogenesis [BR:
psex03019
]
120516562
03036 Chromosome and associated proteins [BR:
psex03036
]
120516562
03029 Mitochondrial biogenesis [BR:
psex03029
]
120516562
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120516562
04147 Exosome [BR:
psex04147
]
120516562
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120516562
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120516562
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120516562
NuA4 complex
120516562
Chromatin remodeling factors
BAF complex
120516562
PBAF complex
120516562
GBAF(ncBAF) complex
120516562
SWR1 complex
120516562
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
120516562
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120516562
Exosome [BR:
psex04147
]
Exosomal proteins
Proteins found in most exosomes
120516562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120516562
NCBI-ProteinID:
XP_039594256
LinkDB
All DBs
Position
16:86460579..86461842
Genome browser
AA seq
375 aa
AA seq
DB search
MEVEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDFLIKLLTERGFSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKTY
ELPDGQVITIGNQRFRCPEAVFQPAFLGMETCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPGIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgaaattgctgcattggttgttgacaatggttcaggcatgtgcaaagcggga
ttcgctggagatgatgctcccagagctgtcttcccatccattgttggtcgcccaaggcac
cagggtgtgatggttggtatgggacaaaaagacagctatgttggtgatgaggcacagagc
aaaagaggaatcctgactctgaagtacccaattgagcatggcattgttacaaactgggat
gacatggagaaaatctggcatcataccttctacaatgagctacgtgtagcacctgaagag
caccctgtcctacttactgaggctcctctgaaccccaaagccaacagagaaaaaatgaca
cagataatgtttgagaccttcaacactcctgccatgtatgtggccatccaggctgtgctg
tccctgtatgcctctgggcgcaccactggcattgtgatggactctggtgatggtgtcacc
cacaccgtgcctatctatgaaggttatgccttgccccatgccattcttcgtctggactta
gctggtcgtgacctgactgattttctcataaagctcctgactgaaagaggcttcagcttc
accaccacagcagaaagagaaattgtccgagacatcaaggagaagctctgttatgttgcc
ctagactttgagcaggagatggccactgctgcttcttcctcctctcttgagaagacctat
gagctgcctgatggtcaagtcatcaccattggaaatcagaggttcagatgccctgaagct
gtcttccagccagccttcttgggaatggaaacttgtggtatccatgagaccaccttcaac
tccattatgaagtgtgatgtggacatccgtaaggatctttatgccaacacagtgctgtct
ggtggcaccacaatgtatcctggcattgcagatagaatgcagaaagagatcactgcgctg
gcacctagctcaatgaaaatcaagatcattgccccacctgagcgcaaatactcagtgtgg
attggaggctccatcctggcctctctgtccaccttccagcagatgtggatcagcaaacaa
gagtatgatgagtcaggccctggtatagtccaccgcaaatgcttctga
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