Polypterus senegalus (gray bichir): 120517484
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Entry
120517484 CDS
T08668
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00514
Other types of O-glycan biosynthesis
psex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120517484 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120517484 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psex01003
]
120517484 (rfng)
Enzymes [BR:
psex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120517484 (rfng)
Glycosyltransferases [BR:
psex01003
]
Glycan extension
O-Glycan
120517484 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
120517484
NCBI-ProteinID:
XP_039595765
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Position
17:complement(93244026..93305140)
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AA seq
386 aa
AA seq
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MHFSRVVISKLCFLLSLAFSAFLLVLIPGLQPLRRPGHLPQPRPQNKSGGGQGGSSSWTP
VGLKIHNDKSIAVTWGRKSKAGNSEFMGRNVSGHAPPRRGALDLNNQQQLPSNEPLHLED
IFIAVKTTRKYHKSRLDLLFQTWISRANEETFIFTDGEDKDLRIKAGDRLINTNCSAAHT
RQALCCKMSVEYDKFIESGKKWFCHVDDDNYVNLVSLIRLLSRYSHTQDVYLGRPSLDHP
IEAPERVKSDGLVSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAEKIRLPDDCTI
GYIIEALLEVQMIHSHLFHSHLENLQRLPTEAVLRQVTLSYGGIENRRNVVSIGGAFSLQ
EDPSRFKTIHCRLYPDTEWCPSKKRT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcacttctccagggttgtaatcagcaaactctgtttcttgctgtccctcgccttttct
gccttcctattggtcctgattcctggcctccagcctctgcgaagaccaggtcaccttccc
cagccaaggcctcaaaataagtcaggcgggggacaaggaggcagcagcagttggactccg
gtggggttgaaaatccacaatgacaagtctatagctgtaacctggggaagaaaaagtaag
gctggaaactctgaattcatgggcagaaacgtcagtggtcatgcacctcctaggagaggc
gcactggatctaaacaaccagcagcagttgcccagtaatgaacccttacatttagaggac
atttttattgctgtgaaaacaacaaggaaataccacaagtctcggctagatctgctgttt
cagacttggatatcgagagccaacgaagaaactttcatatttacagatggagaagacaaa
gacctcagaataaaagcaggagatcgtctgattaacaccaactgttcagctgctcacact
cgccaggccctgtgctgcaagatgtctgtggaatacgacaagttcattgaatctgggaaa
aagtggttctgccatgtggacgatgacaactacgtcaacctggtcagtctgatacgctta
ctctccaggtattcccacactcaagatgtgtatcttgggcggcccagcctggatcacccc
atagaggcaccggaaagagtcaaaagtgatggcctggtatcggtaaaattctggtttgca
acaggtggtgctggattctgcataagccgtggattggccctaaaaatgagtccttgggcc
agcttggggaactttatcagcactgcagagaaaattcggcttcctgacgactgcaccatt
ggctacattattgaggccttactggaggttcaaatgattcacagtcatctcttccactct
cacctggagaatctacagcgacttcccactgaggctgtacttcgacaggtaacgctaagc
tatggtggcattgaaaacaggagaaatgtcgtcagcataggaggagctttttctttgcag
gaggacccttcaaggttcaagacaatccactgccgtctctacccagatactgaatggtgc
ccaagcaagaagagaacgtga
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