Polypterus senegalus (gray bichir): 120518448
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Entry
120518448 CDS
T08668
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120518448 (exd2)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
120518448 (exd2)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120518448 (exd2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
120518448
NCBI-ProteinID:
XP_039597169
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All DBs
Position
18:complement(55455815..55526613)
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AA seq
602 aa
AA seq
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MSKQTHLFMAVATLLGTTLGCLVVWKAVRDQKRKVTQKENGESKRSEEETESEDLYLPAL
PQADELLTVQPVLVSCKEEWGEMWPSLQKDLAVYPVLGMDCEWVSVNGKPGLVSLLQIAT
FSGLCVLIRLPKLNRNDQTLPQTLLDIMQDAGVLKVGVGCYEDGDKLLQDYGIVVKCTVD
LRYLAIRHSRSLIHNGLSLKTLSEDILNFSLNKSLNLRCSNWEADQLSQEQITYAGRDAQ
ASVALFFHLLGLVSEGPLKERGTQQLLAKCQGLIDIPFKLRGSEGENEDDSFSEKKKRSK
RLGSEGKQCLDQVADPRKNKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDKKKARWY
LEKGIGELISEDPFIVKLTFEPSGRPESQQDYYLTAKENLCVVCGKTDSYIRKNIVPHEY
RRHFPVEMKDHNSHDVLLLCTSCHATSNYYDTLLKQQLAEEYNAPLGCEDGVRLLEDGDR
RQVRSAARALLNAESLPESRKVELLKLIQDFFGIKEVTAEKVQEAAGLETRIFNENYVPH
GLKVVKMNAKGGLLGLMELEKRWRQHFLTVMKPQHLPPLWSVDHNHSKLLRKYGDQLDVQ
LH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacagacacacttattcatggcagtggccactttacttgggacaacattaggt
tgtttagttgtctggaaagctgtcagagatcagaaacgaaaagtgacacagaaggagaat
ggagaatctaaaagatctgaggaggagacagaaagtgaggatctgtatttgcctgccctt
cctcaggctgatgaacttttgaccgtgcagccggtgcttgtgtcctgtaaagaagagtgg
ggggagatgtggccatctttacagaaggatctggctgtgtatcctgtcttgggaatggac
tgtgaatgggtgtctgtaaatggaaaaccaggcctggtttcattgcttcaaattgccaca
tttagtggcctctgtgttctcattagactgccaaaactcaacaggaatgaccagacacta
ccacagaccctcctagatatcatgcaagacgccggtgttctaaaagttggagttggatgc
tatgaagatggggataagctgctgcaagactatggaattgtagtaaagtgcacagtggac
ctgcggtatctggcaataaggcacagtcgatctctaatccataatggactaagcttgaag
accttatctgaagatattcttaacttctctctcaacaagtccctaaatctaaggtgcagt
aactgggaagctgatcaactttcccaggagcagatcacttatgcaggcagggacgcccaa
gcatctgttgccttattcttccatttgcttggtttggtctcagaaggcccacttaaagaa
agagggacacaacagcttttagccaagtgtcagggtcttattgatatacctttcaaacta
agagggagtgaaggagagaatgaagatgacagcttttcagaaaagaaaaaaagaagcaaa
cgtttaggttctgaaggcaagcaatgtctggatcaagtagcagaccctcgtaaaaataag
aggaaacccctcggtgttgggtactcggcaagaaaatccccactatatgacaactgtttc
cttcatgcaccagatggacagccattatgcacttgtgacaagaaaaaagccaggtggtac
cttgaaaagggtattggagaactgattagtgaagatccgtttatagtgaagcttacattt
gaaccatctggaaggccagaatctcagcaggattactacctcactgccaaggaaaacctc
tgtgttgtatgtggaaagactgattcatacattaggaaaaatattgttcctcatgagtat
cgtcgtcattttccagttgaaatgaaggaccataactctcatgatgtcttacttctgtgc
acatcttgtcatgccacatcaaactattacgacaccctactaaaacaacagcttgctgaa
gagtataatgcacctttgggatgcgaggatggagtacgtctgcttgaggatggtgatagg
aggcaggtacgttccgcggcacgagcactgctaaatgcagaaagcctacctgaaagtcgg
aaagtggagctcctgaagctaatacaagatttctttgggatcaaggaagtgactgctgag
aaggtgcaagaagcagctggactggaaaccaggatcttcaatgaaaactatgttcctcat
ggcctgaaggtagtcaagatgaatgccaagggtgggcttcttgggctaatggagctggaa
aagcgttggcggcaacattttctaactgtaatgaagccacagcacctgcccccactgtgg
tctgttgatcataaccacagcaaacttttacgcaaatatggggaccagcttgatgttcag
ctccactga
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