Polypterus senegalus (gray bichir): 120518857
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Entry
120518857 CDS
T08668
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120518857 (bcl11ba)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120518857 (bcl11ba)
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Ortholog
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GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
CCHC_BCL-11A
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
Zn_SUZ12
zf-C2H2_ATbp_2nd
GAGA
DUF3268
zf-C2H2_CASZ1
Motif
Other DBs
NCBI-GeneID:
120518857
NCBI-ProteinID:
XP_039597790
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All DBs
Position
18:93242595..93337977
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AA seq
811 aa
AA seq
DB search
MSRRKQGNPQHLSQREIITPEVDHVDPGIADDDIHNMLDPNGIGSSVGMGDHDLLTCGQC
QMNFPLGDILVFIEHKRKQCNGLSSVQGYYEKSLDRGSPSPQRSELRKVVEPVEIGIQVT
PEEEDERLLTPTKGICPKQENIIAGRDEPSSYICTTCKQPFNSAWFLLQHAQNTHGIRIY
LETNPSSSSLTPRITIPPTMGSEPVPQSPLTNFLGDSNPFHLLRMTGPVLREPPGFVENR
LPNTPPFVSPPPRHHLDPHRLSAEEMGLISQHPSAFERVMRLTPMAIESQSMDFSRRLRE
LAGNNSSTPPLSPSRSNPMHRLLNPFQPSPKSPFLSTPPLPPMPPNSTTPPQPQSKSKSC
EFCGKTFKFQSNLVVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKPGSMTGRSD
DGLSTTSSPEPGTSEITGEGIKSREGEFRNESEPSLGQENEEEEEEEEEEELENESRPES
SFSIDSEFCRNRENGSKPPPDDKTLSLGKIVENVGLSTIQQYNDILGDNRKRGPFSKRCS
DVQRDTRDDDSVVGEIDRVEVGAVNGRNFGSGDAFSGLFPRKPTPITSPSLSNSSAKRIK
IEKDLDLPPAPLIPSENVYSQWLVGYAASRHFIKDPFLGFTDSRQSPFATSSEHSSENGS
LRFSTPPGDMLDGGLSGRSGTASGGSTPHLGGGPGPGRPSSKEGRRSDTCEYCGKVFKNC
SNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQLGKEVYRCDICQMPFSVYST
LEKHMKKWHGEHLMTNEDFPYNMLRRFNFVT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcagggaaacccacagcacttgtcacagagagaaataatcacaccc
gaagttgaccatgtggatccggggatcgccgatgatgatattcataatatgctggatcca
aatggcattgggtccagcgttggcatgggggaccatgatctcctgacctgcggacagtgc
caaatgaatttcccactgggggacattttggtttttatcgagcacaaaaggaagcagtgc
aatggcctcagcagtgtccagggctattatgaaaaaagcctggacaggggaagcccttca
ccccaacgctctgagctcaggaaagtggtggaaccagtggaaatcggcatccaggtcaca
ccagaggaggaggacgagagactgttgactcccacaaaaggaatttgccctaagcaagaa
aacatcatagcaggtcgagatgagccttcaagctatatttgcacaacctgcaaacaacct
ttcaacagcgcctggtttctcctccagcatgcccagaatacgcatggaattcgcatctac
cttgagacaaatccatctagtagttctttgaccccaaggatcaccatccctccaacgatg
ggctcggagcctgtacctcagtctcctctaactaactttcttggcgacagcaatcctttc
catctgcttcgaatgacaggacctgtgcttcgggagccaccgggttttgtagaaaatcgt
cttccgaatacacccccttttgtcagccctccacctcgccatcatttggacccccatcgc
cttagtgccgaggaaatgggtttgatctcccaacatcccagtgccttcgaaagagttatg
cgcctgacacccatggcaatagagtcccagtcgatggatttttctcggcgactacgggag
cttgcgggaaacaacagttccacgccaccactttcacccagccgctccaaccctatgcat
cgcctgctcaaccctttccaaccgagtccaaaatctccattcctgagcactccaccactg
ccaccgatgccacctaacagcaccactcctcctcagccccagtcaaaaagtaagtcttgt
gaattctgtggaaagactttcaaatttcagagtaacctggttgtacatcggcgaagtcac
acaggagaaaagccctacaagtgccaactctgtgaccatgcatgttcccaagccagtaaa
cttaaaagacacatgaagacacacatgcacaagcctggctctatgacagggaggtctgat
gatgggctctctaccactagttctcctgagccaggtacgagtgagatcacgggtgagggg
ataaaaagtagagagggtgagtttaggaatgaaagtgagccttccctagggcaagaaaat
gaggaagaggaggaggaagaggaagaagaagagctagaaaatgagagcaggcctgagtca
agtttcagcattgactctgagttttgccgtaatagggaaaatggttctaaacctccacca
gatgacaaaaccctctcgttaggaaagattgtggagaatgtgggactgagcactatacag
cagtacaatgacatattaggtgacaatcgtaaaagaggacctttctccaaaagatgttca
gatgtccagcgtgacacaagagatgatgattcagttgtaggggagatcgatcgcgttgaa
gtaggtgcagtgaatggcagaaattttggctcaggtgatgctttctcaggcctgtttcct
cgcaagcccaccccaattacgagccccagtttatccaattcatcagcaaagagaattaaa
atagaaaaggacttagacttgccaccagcacctcttattccctcagaaaacgtctactca
cagtggctagtaggttatgcagcatcaaggcacttcattaaggatccatttcttggattc
actgactcaagacaatctcccttcgccacctcatccgaacattcatcagaaaacggcagt
ctgcgtttctctaccccaccaggggacatgttagacggaggtctctcagggcgtagtgga
acggcaagtggtggtagtacccctcacctgggaggaggacctgggccaggtaggcccagt
tcaaaggagggccggagaagtgacacctgtgagtactgtggcaaagttttcaagaactgc
agcaacctgacagtccatcggcgcagtcacactggagagcgtccatacaagtgtgagctg
tgcaactatgcctgtgctcagagcagcaagctgacccgccatatgaagacacacggacag
cttggtaaagaagtgtatcgctgcgacatttgccaaatgcccttcagcgtgtatagtacc
cttgagaaacacatgaaaaaatggcatggagaacatttgatgacgaacgaggacttccca
tataacatgctaagacgcttcaactttgtcacataa
DBGET
integrated database retrieval system
