Polypterus senegalus (gray bichir): 120523317
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Entry
120523317 CDS
T08668
Symbol
mmp13b
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120523317 (mmp13b)
Peptidases and inhibitors [BR:
psex01002
]
Metallo peptidases
Family M10
120523317 (mmp13b)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Astacin
Reprolysin_3
Reprolysin_5
Reprolysin_4
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
120523317
NCBI-ProteinID:
XP_039600461
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Position
2:123538833..123554122
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AA seq
465 aa
AA seq
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MKSSILFFVLSAAHLYAFPLLKEETEADENEWQRAKEYLKRFYNLPRGIEGTRRSSSAMT
EALKSMQSFFGLKITGHLDDDTIKVMKMSRCGVPDVAEYNVFPKNLKWETTNVTFRIVNY
TPDMKSSEVDKAIHNALKVWSEVTPLVFKKIHEGTADIMISFGAKEHGDFNPFDGPNGLL
AHAYPPGKGIGGDTHFDEDETWSADASGYNLFIVAAHEFGHALGMAHSQDPGALMYPVYS
YSTGFPLSNDDMKGIQFLYGPNPFHPKVNPRPEAPDKCDAYLSFDAVTKLRGETIIFKDR
FYWRLHPQLTNAEQTLIKMTWPVLPNKIDAAYESPEKDLVFIFKGIKMWAMNGYDLVDGY
PKYIHKLGLPKSVRKIDAAVHIRETGKTLLFTEEDYWSYDENSHTMDKDSPRSIEDDFPG
IGEEIDAAFQENGYLYLYKGPIQFEYNYAARRVLRILRANSLFNC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcagcattctcttttttgtgctgagtgctgcacatctgtatgctttcccactg
ttgaaagaagaaactgaggcagacgagaatgaatggcaaagagcaaaagaatatcttaaa
agattctacaatcttccacgtggaattgaaggaaccagaaggtcttccagtgcaatgaca
gaggcacttaaatccatgcagtcattttttgggctaaaaataacaggacatctggatgat
gatactataaaggtgatgaaaatgtcaagatgtggtgtccctgatgtggctgagtacaat
gtgttcccaaaaaaccttaaatgggaaacgacaaatgtaacattcagaattgtaaattat
actccggatatgaaatcttcagaagttgataaagcaatacacaatgctctgaaggtctgg
agcgaagtaacacctctggttttcaaaaaaatccatgaaggcactgctgacattatgatt
tcttttggtgcgaaagaacatggtgatttcaatccatttgatggtcccaatggtcttctt
gcccatgcatacccacctggtaaagggatagggggtgacactcattttgatgaagatgaa
acatggtcagcagatgccagtggctacaacttgtttattgttgctgctcacgagtttggt
catgcgctgggaatggctcactctcaggaccctggagccttgatgtatccagtctactct
tacagcacaggcttcccgctatcaaatgatgatatgaaggggatccagttcctttatggc
cctaatccattccatcctaaagtaaatcctcgccctgaagctccagataagtgtgacgca
tacttgtcttttgatgctgtcacaaaacttagaggtgaaacaattatcttcaaggacaga
ttttattggcgtcttcatccacagcttactaatgcagaacagacattaatcaaaatgacc
tggccagtactacccaataagattgatgcggcctatgaatctccagaaaaagatctggtc
tttatttttaaaggaatcaaaatgtgggcaatgaatggttatgacctggttgatggatac
ccaaaatacatccataagcttgggctccctaaatcagttcgaaaaattgatgctgctgtt
cacataagggaaactggaaagactctgctgttcacagaggaagactactggagttatgat
gaaaacagtcacactatggataaagattcccctcgatcaattgaagatgatttccctgga
attggagaagaaattgatgctgccttccaagagaatggttacctgtacttgtacaaaggt
ccgatacaatttgaatacaactatgcagccaggagagttctccggattttaagagcaaac
agcctgtttaattgttaa
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