Polypterus senegalus (gray bichir): 120524037
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Entry
120524037 CDS
T08668
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04110
Cell cycle
psex04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120524037 (rb1)
04218 Cellular senescence
120524037 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120524037 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120524037 (rb1)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120524037 (rb1)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120524037 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
Rb_C
RB_B
DUF3452
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
120524037
NCBI-ProteinID:
XP_039601786
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All DBs
Position
2:300919343..301206869
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AA seq
917 aa
AA seq
DB search
MPPKNPRKAASSASAAEGSKPVSKQLSGSELLSQESRLKDERHKDKAAELVSLCEHFRVA
DEVCDKAWELSQILLSSMETEQGTNKMLYGACLLIAAIELDEVQFTLSDLLKNINMNVSN
FFNLLKKLDVNMDTISTKVNSVVSRLEKKYEVQHALYQRFETNLKKIFVEESSTRVKAVS
DSKSIVRSCWILFLLAKGKVLQMEDDLVISFQLLLCVLEYFVKLSPHALLKQPFKDVVKD
LKETVPIRSSRRGTGRIVRTAPKPVEPDFRVVEVLCKENECNIDEVKNVYQKSFMSFLEM
VNLTNQDGIPKEEEFSKQYEELYMKNKDIDARLFLDQDETLLRLKTEECLLEKTPKKNCL
DDDSNLIPPQTPVRAALNSINQLKIILNSASSKPSENLMKYFGNCTVNPTEGIAKRVDRL
GMAFTDRFAKAMGQACAEIGSQRYKLGVRLYYRIMEIMLKLEEMRLSVHNFSMLLNDNIF
HTSLLACALEVVMATYGSTNLKSFGSSETDLLFPWILDVFGLKAFDFYKVIESFIKAEPN
LTWEMIKHLERCEHRIMESLAWVSDSPLFELLKQLKEQGVQVEQSEMPGGLDLPLQHNHT
AADLYLSPVKTPGKKAPPTNGRKPQTANDHAPPSAPAQPTSQKMQKSTSLSLFYKKVFRL
AYKRLNMLCTTLLREHSELEPIIWTLLQHTLQHEYELMKDRHLDQIMMSAMYAICKVKNI
DLRFKTIVTAYKDLPNTNQETFKRVLIREGQYDSIIVFYNLVFMQKLKTNILQYASSRPP
TLSPIPQIPCSPYKLYANSPLRVPGSNNIYISPLKSSMLSPTKKIQISIGDSFGTSDKFQ
MINQMVSSEWSHKRGMDMADAPRPLKRLRFDAEEADNSKPAQESMFQKKLAEMTSTRTRM
QEQKLKGGADSLSREEK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgaaaaatcccaggaaggcagcctcttccgcctctgctgccgaaggctcaaag
ccggtctcaaagcagctgtcgggaagcgagctgctgagccaggaatcgcgactgaaagac
gaaagacataaagacaaagcagctgaacttgtctcattgtgtgagcatttcagagttgca
gatgaagtttgtgataaagcttgggagttatcacagattctgctgtcctcaatggaaact
gagcagggaactaacaaaatgctttatggagcctgtttgctgattgctgcgatagaacta
gatgaagttcagtttactcttagtgatctgttgaagaatataaatatgaatgtgtccaac
ttttttaatttgctgaaaaagctggatgtaaatatggacaccatcagcactaaagtgaat
agtgttgtctcaaggctcgaaaaaaaatatgaagtacagcatgccctttatcagaggttt
gaaacaaatttaaagaaaatttttgttgaagaatccagtactcgtgtgaaggcagtgtca
gattcaaaatcaattgttagaagctgttggattttgtttttgcttgcaaaaggaaaagtg
ttacagatggaagatgaccttgtgatctcttttcagcttctgctgtgtgtccttgagtat
tttgttaagttgtcacctcatgcacttctaaaacaacctttcaaggatgtcgttaaagat
ctgaaagaaaccgtaccaatccgatcctccaggaggggaacaggcagaattgtacgtact
gcccccaaacccgtagagcctgacttccgggttgtggaagtcctgtgcaaagaaaatgaa
tgcaatattgatgaggtgaaaaatgtgtatcagaaaagtttcatgtcttttttggaaatg
gtgaatttgaccaaccaggatgggatacccaaggaagaagaattttctaagcaatatgaa
gaactatatatgaagaacaaggatatagatgccagattattcctggatcaggatgaaaca
ttacttcgtttgaagactgaagagtgtctgctagaaaaaacacccaagaagaattgctta
gacgatgactccaatctgattcctcctcagacccctgtaagggctgccttgaattcgatt
aatcaactgaaaattatcctgaattctgcaagcagcaagccttctgaaaatctgatgaaa
tattttggtaactgcacagtaaatcccacagagggtattgccaaaagagtggacaggctt
ggtatggcatttacagatcgatttgctaaggcaatgggacaagcttgtgctgaaattggg
tctcagaggtacaagctgggtgttcgtttgtactacagaataatggaaatcatgctgaag
ttggaagaaatgcgtctatctgttcacaattttagtatgttattgaatgacaatattttc
cacacgtcattgttagcctgtgcattggaagttgttatggctacatatggcagtaccaat
ttaaaaagctttggctcatcggaaacagacctgctctttccttggattcttgatgtgttt
gggctgaaagcctttgacttctataaagtaattgagagcttcatcaaagctgagccaaat
ctgacatgggaaatgataaagcatctagagcgctgtgagcatcgcatcatggaatccctg
gcttgggtctcagactcccctttgtttgaactgctcaaacagctgaaggaacaaggagtt
caggtggagcagtctgaaatgccaggcggcctcgatctcccgctgcaacacaatcacacc
gctgcagacctgtacctgtctccagtcaagacgccaggaaagaaagcacctcctacaaat
ggcaggaagcctcagacagctaacgaccatgcaccacctagtgctccagcacagccgacc
tctcaaaaaatgcagaaatctacctcactttcccttttttacaagaaagttttccgcctg
gcctacaagcgtctcaacatgctgtgtacaactctactaagagaacattctgagttggag
ccgatcatttggaccctccttcagcacacactgcagcacgagtatgaactcatgaaggac
agacatcttgatcagataatgatgtcagccatgtacgcaatctgtaaggtgaagaacatt
gatctcaggtttaagaccattgtgacagcctacaaagatttacccaacactaaccaagag
actttcaaaagagttcttattcgagaagggcagtatgactctatcattgttttttataat
ctagtttttatgcagaagctgaagaccaatatcctgcagtatgcctcatctaggcctcca
acactgtctcccatcccacagataccttgcagcccatataaattatatgccaactcaccc
ctgagggtaccaggcagcaacaacatctacatctcacctctgaaaagcagcatgttgtca
ccaactaaaaagatccagatatctattggggactcatttgggacttcagacaagttccag
atgatcaaccagatggtaagcagtgagtggtcccataaaagaggaatggacatggcagac
gcccctcggccactgaagcgattacgttttgatgcagaagaagcagacaacagcaaacct
gcccaagagtcgatgttccaaaagaagttggctgaaatgacatcaacgagaacccgaatg
caggagcagaagctcaaaggtggagcggactctttgagcagggaagagaaatga
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