Polypterus senegalus (gray bichir): 120530683
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Entry
120530683 CDS
T08668
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 2-like
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120530683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120530683
Enzymes [BR:
psex01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
120530683
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120530683
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Ariadne
SBP_bac_6
ADH_zinc_N
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120530683
NCBI-ProteinID:
XP_039611038
LinkDB
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Position
6:191947435..191976493
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AA seq
1158 aa
AA seq
DB search
MTFTNLGKNSAKYVRVSVDTPPENLFELLTSCWQLDVPNLLISVTGGAKNIVMKPQLRNM
FRRGLIKVAQSTGAWIITGGSHAGVMKHVGEAMRDSALSSTSKDGKIVAIGIGTWGIVYN
QESLIRRPGSSLPAEYAINEGKQGQLSFLDYNHSHFILVDDGTHGIYGVEIVLRAKLEKF
IAKQTIGKSENGGVGINIPAVCLVLGGGPGTLDTIYNAMQNGTPCVILEGSGHVADVIAE
VATLPLSQITVEEVQKHLKTFFAKDFDCFSDDKIIEWTKKIQDIMRIPQLLTVFRMDKKV
NKELDMAILQAVLKASKNVDYYGHDNWEHQLKLAVAWNRMDIAKCKIFKDDQLLKSSGLR
PVMMVEALIADKSNFVRLFLENGMNLQEVLTKSVMLELFNNLSSSSLIYRMLIKELKEEE
VEGPELAHGQWRIQMHHVSNVLQELLGDFTQPLYHLQRSSSKFAVFIHVRLSGELALMSN
LHPSVFLXLKSNGQEVFEDPIRDLFIWAILQCRTELAQIVWEQCQDCLAAALAASKILKE
LAKKEEDTDGSEEMQNLAEEYEKHAIGVFTECHRRDKERAQKLLIRVSKSWGHITCLRLA
LEADNKNFVAQGGVQALLTKIWWGQLAEDTHLCKVLLCMLFFPLIYTGLITFRQDEQINK
QNARLEVTSSELMAENPSVLKKRWDKEMPKQNSQRGVTDGDLKAENPTVTKRRYSHKKMH
LKPLTCWSRLQYFYSAPVIVFYWNVVSFFGFLWLYAYVLMMNFQKQPVWQEILLYVWVCT
LFCEELRQLFHGRDKLGFLRKAEIYFSKMWNVFDVLSFCFFAAGVACRLAPATLYFGRII
LSIGFIVYCLRLVDIFTVNKNLGPKIIIVKRMLKDVFFFLFLLGVWVVAYGVARQAILIE
NETRLEWIFRGVVHQPYLTIFGQMPSSMDSVNYDGSQCTVNGTNPTKPKCPILDSNGKPA
FPTWLTIILVCIYLLFANILLLNLLIAMFNFTFQMVQDNDDQIWKFQRFGLIKEYHCHPT
FPPPFIILVHIYLFFKRVTKQKEDKRYKQFKQKLPNSEEMALLSWESFMKEIYLMRLQQE
LSNSNEQKIQDLTDRVGILVKLLEGDNGKQVIEKRLAHLEEQVRFGSINGVAGWPLCGAD
TGAMPLCFSCRCQCLWRH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacctttactaatctggggaaaaacagtgccaagtatgtccgagtctccgtcgacact
ccccctgagaatctgtttgagttgctgacatcctgctggcagctcgatgtgcccaacctg
ctgatctcagttaccggaggtgccaagaacattgtcatgaagccacagctgaggaatatg
ttccgtcggggcttgatcaaggtggcacagtccacaggtgcctggattatcacgggtggc
tcacatgccggtgtcatgaagcatgtcggggaggcaatgcgagactctgccttgagcagt
acgtccaaagatggaaagattgtagccattggcatcggcacctgggggattgtgtataac
caggaaagtctgatcagaaggccagggagcagcttgccagcagagtatgccattaatgag
ggaaagcagggccagctgtcctttctggactacaaccactcacatttcatcctggtcgac
gatggcacccatggcatctacggggtggagattgtgctgagggctaaactggagaagttt
atagccaaacagaccatagggaagagtgagaatggaggtgttggcataaacatcccagca
gtgtgcctcgtgttggggggcggcccgggcaccttggataccatctacaacgccatgcag
aacggcacaccctgtgtgatcctggagggctcgggtcacgtcgctgatgtgatagctgaa
gttgccaccctacctctttcccagatcacagtggaagaggtacagaaacaccttaagacc
tttttcgccaaggactttgactgtttctccgatgacaagattatcgaatggacgaagaag
atccaggacatcatgagaataccccaactgttgacggtcttccgaatggacaagaaggtc
aacaaggaactggacatggccatcctgcaggctgtgctcaaagcttccaagaatgtggac
tattatgggcatgacaactgggagcaccagctgaagctcgctgtggcgtggaacaggatg
gacattgccaagtgcaagatcttcaaggatgaccagctcctgaagtcgtcaggcctgcgt
cctgtgatgatggtggaggcgctgattgcagacaagtccaattttgtgaggctcttcctg
gagaacggcatgaacctccaagaggtcctgaccaagagcgtcatgctggagctctttaac
aacttgtcttccagcagtctgatctaccgcatgctgataaaggagctgaaggaggaggaa
gtggaggggccggagctggcacatggccagtggaggatccaaatgcaccacgtctccaat
gttcttcaggagctccttggagacttcacccagcccctttaccacctgcagcggagcagc
tccaagtttgcagtgttcatacatgtgaggctctctggcgagttagcgctaatgtctaac
ctacacccctctgtcttcttgtagttgaaaagcaatgggcaggaagtgtttgaagatccc
atccgagacctctttatttgggcgatactgcagtgcaggactgagctggcccagattgta
tgggagcagtgccaggattgcttggctgctgcccttgcggcctcaaagatcctcaaagag
ctggcgaagaaggaggaggatacagatggatcagaagagatgcagaacctggccgaggag
tacgagaagcacgccatcggagtcttcaccgagtgccatcgcagagacaaggaacgagcc
cagaagctgctgatccgcgtctccaagtcctgggggcacatcacctgtctgcgactggca
ctggaggcagacaacaagaactttgtggcccagggcggcgtgcaggccctgctgactaag
atctggtggggacagctggccgaggacacccatttgtgtaaggtgctgctctgcatgctc
ttctttcccctcatctacactggactcatcactttcaggcaggatgaacagattaacaaa
caaaatgcccggctagaagttactagcagtgagttaatggcagaaaatcccagcgtcctg
aaaaaaaggtgggataaagagatgcccaagcaaaattcccaacggggagtcactgatggc
gacttgaaggcagaaaatcccaccgtcacaaaaagaaggtactcccataagaagatgcac
ctgaagcctctgacatgttggagccgcctacagtacttctactcggctccggtgatcgtc
ttctactggaacgtcgtctccttctttggcttcctgtggctgtacgcctacgtgttgatg
atgaactttcagaagcagccggtgtggcaggagattctcctgtacgtgtgggtctgcacc
ctcttctgtgaggagctcaggcagctcttccacggtcgggacaagcttgggttcctgagg
aaggcagagatttacttcagtaaaatgtggaacgtatttgacgtgctgagcttctgcttc
tttgcagcaggagtggcctgcaggctggcccccgccactttgtactttggtcggatcatt
ctgagcatcggcttcatcgtttactgcctgcgcctcgtggacatttttactgtaaataaa
aacctggggccaaagatcatcatagtgaagcgcatgctcaaagacgtcttcttcttcctc
ttcctgctgggggtctgggttgtggcctatggagtcgccagacaggccatcttgattgaa
aacgagaccaggctggaatggatattccgtggggtcgtgcaccagccttacctcaccatc
tttggacagatgccctcaagcatggacagtgtgaactacgacggaagccagtgcaccgtg
aatggtaccaaccccaccaaacccaagtgccccattttggacagtaacgggaagccggcc
ttccccacctggctgaccatcattcttgtctgcatctacctgctgtttgccaacattttg
ctcctcaacctgctgattgccatgttcaatttcactttccagatggtacaggacaacgat
gaccagatctggaagttccagcgttttgggttgatcaaggagtaccactgtcacccgacg
ttcccaccacccttcatcatcttggtgcacatctacttgttcttcaagcgggttaccaag
cagaaggaggacaagagatacaagcagttcaaacaaaagctgcccaacagcgaggagatg
gcgctcctctcctgggagtccttcatgaaggagatctacctgatgagactgcagcaggag
ctgagcaacagcaacgagcagaagatccaggacctgaccgatagggttggcattttggtc
aaactactggaaggtgacaatggcaagcaggtcattgagaagcggctggcacacttggag
gagcaggtgagatttgggagcataaatggtgtggcaggttggcctctgtgtggtgctgac
actggcgctatgccactctgcttctcttgcaggtgtcaatgtctatggaggcattag
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