KEGG   Polypterus senegalus (gray bichir): 120531407
Entry
120531407         CDS       T08668                                 
Name
(RefSeq) actin, cytoplasmic 3-like
  KO
K05692  actin beta/gamma 1
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03082  ATP-dependent chromatin remodeling
psex04145  Phagosome
psex04210  Apoptosis
psex04510  Focal adhesion
psex04520  Adherens junction
psex04530  Tight junction
psex04810  Regulation of actin cytoskeleton
psex04814  Motor proteins
psex04820  Cytoskeleton in muscle cells
psex05100  Bacterial invasion of epithelial cells
psex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120531407
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120531407
  09143 Cell growth and death
   04210 Apoptosis
    120531407
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120531407
   04520 Adherens junction
    120531407
   04530 Tight junction
    120531407
  09142 Cell motility
   04814 Motor proteins
    120531407
   04820 Cytoskeleton in muscle cells
    120531407
   04810 Regulation of actin cytoskeleton
    120531407
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120531407
   05100 Bacterial invasion of epithelial cells
    120531407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psex03021]
    120531407
   03019 Messenger RNA biogenesis [BR:psex03019]
    120531407
   03036 Chromosome and associated proteins [BR:psex03036]
    120531407
   03029 Mitochondrial biogenesis [BR:psex03029]
    120531407
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psex04812]
    120531407
   04147 Exosome [BR:psex04147]
    120531407
Transcription machinery [BR:psex03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120531407
Messenger RNA biogenesis [BR:psex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     120531407
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     120531407
    NuA4 complex
     120531407
  Chromatin remodeling factors
   BAF complex
    120531407
   PBAF complex
    120531407
   GBAF(ncBAF) complex
    120531407
   SWR1 complex
    120531407
Mitochondrial biogenesis [BR:psex03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    120531407
Cytoskeleton proteins [BR:psex04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     120531407
Exosome [BR:psex04147]
 Exosomal proteins
  Proteins found in most exosomes
   120531407
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 120531407
NCBI-ProteinID: XP_039612729
LinkDB
Position
6:complement(111955816..111956943)
AA seq 375 aa
MQDYITSLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKESYVGEEAQC
KRGILTLKYPIMHGIVTNWDDMEKIWHHTFHNELRVAPEEHPVLLTEAPLNPKANREKMT
QVMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIFEGYSLPHAIVRLCL
AGCDLTDYLMKILTERGYSFTTSAEREIVRDIKEKLCYVALDFHQEMTTAASAPTQEKTY
ELPDGQVITIVNERFRCPEALFQPSLLGMESYGIHETTFNSIMKCDIDIRRDLYSNILLS
GGTTMYPGISERMQKEITALAPSSIKVKIISPSERKYSVWIGGSILASLTTFQHMWITKH
EYNECGPSIVHHKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgcaagattacattacctccctggtcattgataatggttctggtatgtgtaaagcagga
tttgctggtgatgatgctcctcgagcagttttcccttctattgttggtcgtccaagacat
caaggtatcatggttggtatgggacaaaaagaaagttatgttggtgaagaggcccagtgt
aagagaggtatactgaccctgaaatatccaataatgcatggcattgttaccaactgggat
gacatggagaaaatttggcatcacacattccacaatgagctacgtgttgccccagaagag
cacccggtcctccttactgaggctccattaaaccccaaagccaacagggaaaagatgaca
caagtcatgtttgaaaccttcaataccccagccatgtatgttgctatccaggctgtgctc
tctctttatgcatctggccgtaccactggtattgtgatggactctggtgatggtgtcact
cacactgtgccaatctttgaaggatattccctacctcatgccattgttcgtttgtgcttg
gccggctgtgacttgactgattacctcatgaagatattaactgagagaggctacagcttt
accacttcagctgaaagagaaattgttcgtgatattaaagagaagctctgctatgttgca
ctcgattttcatcaggagatgactactgctgcctctgcacctactcaagagaagacatat
gagctgcccgatggccaggtcatcaccattgtaaatgagagattcagatgccctgaagct
ctcttccaaccttccttgctggggatggaatcatatggtatacatgagaccaccttcaac
tccatcatgaaatgcgatattgatattcggagggatctttactcaaacattcttttgtca
ggtggtactacaatgtatccaggtatttcagaaagaatgcagaaggagatcacagccctg
gctccaagctcaataaaagtaaagatcatttctccttcagaacgtaaatattcagtctgg
attggaggctccatcctggcctcccttactaccttccagcacatgtggatcaccaagcat
gagtataatgagtgtggtccttccattgtccatcacaaatgtttctaa

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