Polypterus senegalus (gray bichir): 120531407
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Entry
120531407 CDS
T08668
Name
(RefSeq) actin, cytoplasmic 3-like
KO
K05692
actin beta/gamma 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
psex04145
Phagosome
psex04210
Apoptosis
psex04510
Focal adhesion
psex04520
Adherens junction
psex04530
Tight junction
psex04810
Regulation of actin cytoskeleton
psex04814
Motor proteins
psex04820
Cytoskeleton in muscle cells
psex05100
Bacterial invasion of epithelial cells
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120531407
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120531407
09143 Cell growth and death
04210 Apoptosis
120531407
09144 Cellular community - eukaryotes
04510 Focal adhesion
120531407
04520 Adherens junction
120531407
04530 Tight junction
120531407
09142 Cell motility
04814 Motor proteins
120531407
04820 Cytoskeleton in muscle cells
120531407
04810 Regulation of actin cytoskeleton
120531407
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120531407
05100 Bacterial invasion of epithelial cells
120531407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120531407
03019 Messenger RNA biogenesis [BR:
psex03019
]
120531407
03036 Chromosome and associated proteins [BR:
psex03036
]
120531407
03029 Mitochondrial biogenesis [BR:
psex03029
]
120531407
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120531407
04147 Exosome [BR:
psex04147
]
120531407
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120531407
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
120531407
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120531407
NuA4 complex
120531407
Chromatin remodeling factors
BAF complex
120531407
PBAF complex
120531407
GBAF(ncBAF) complex
120531407
SWR1 complex
120531407
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
120531407
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120531407
Exosome [BR:
psex04147
]
Exosomal proteins
Proteins found in most exosomes
120531407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
120531407
NCBI-ProteinID:
XP_039612729
LinkDB
All DBs
Position
6:complement(111955816..111956943)
Genome browser
AA seq
375 aa
AA seq
DB search
MQDYITSLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKESYVGEEAQC
KRGILTLKYPIMHGIVTNWDDMEKIWHHTFHNELRVAPEEHPVLLTEAPLNPKANREKMT
QVMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIFEGYSLPHAIVRLCL
AGCDLTDYLMKILTERGYSFTTSAEREIVRDIKEKLCYVALDFHQEMTTAASAPTQEKTY
ELPDGQVITIVNERFRCPEALFQPSLLGMESYGIHETTFNSIMKCDIDIRRDLYSNILLS
GGTTMYPGISERMQKEITALAPSSIKVKIISPSERKYSVWIGGSILASLTTFQHMWITKH
EYNECGPSIVHHKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattacattacctccctggtcattgataatggttctggtatgtgtaaagcagga
tttgctggtgatgatgctcctcgagcagttttcccttctattgttggtcgtccaagacat
caaggtatcatggttggtatgggacaaaaagaaagttatgttggtgaagaggcccagtgt
aagagaggtatactgaccctgaaatatccaataatgcatggcattgttaccaactgggat
gacatggagaaaatttggcatcacacattccacaatgagctacgtgttgccccagaagag
cacccggtcctccttactgaggctccattaaaccccaaagccaacagggaaaagatgaca
caagtcatgtttgaaaccttcaataccccagccatgtatgttgctatccaggctgtgctc
tctctttatgcatctggccgtaccactggtattgtgatggactctggtgatggtgtcact
cacactgtgccaatctttgaaggatattccctacctcatgccattgttcgtttgtgcttg
gccggctgtgacttgactgattacctcatgaagatattaactgagagaggctacagcttt
accacttcagctgaaagagaaattgttcgtgatattaaagagaagctctgctatgttgca
ctcgattttcatcaggagatgactactgctgcctctgcacctactcaagagaagacatat
gagctgcccgatggccaggtcatcaccattgtaaatgagagattcagatgccctgaagct
ctcttccaaccttccttgctggggatggaatcatatggtatacatgagaccaccttcaac
tccatcatgaaatgcgatattgatattcggagggatctttactcaaacattcttttgtca
ggtggtactacaatgtatccaggtatttcagaaagaatgcagaaggagatcacagccctg
gctccaagctcaataaaagtaaagatcatttctccttcagaacgtaaatattcagtctgg
attggaggctccatcctggcctcccttactaccttccagcacatgtggatcaccaagcat
gagtataatgagtgtggtccttccattgtccatcacaaatgtttctaa
DBGET
integrated database retrieval system