Polypterus senegalus (gray bichir): 120532273
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Entry
120532273 CDS
T08668
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120532273 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120532273 (c9orf72)
Membrane trafficking [BR:
psex04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
120532273 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
120532273
NCBI-ProteinID:
XP_039614075
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All DBs
Position
7:2081740..2202173
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AA seq
461 aa
AA seq
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MSASCPPQSPAVPKTEIAIEGESPLLAATFAYWDNILGPRVRHIWSPKTEQLLLSDGEIT
FLANHTLNGEILRSAEYGAIDVKFFVLAEKGVIIVSLIFDGELKADKNTCALSIILPQTE
LSFYLPLHRVCVDRLKHIIRKGRIWMHKGHSIISLLTTEIIPVMELLSSMKSHSVPAEID
LKDTLLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPDKVNKIVRTLCLFLTPTER
KCSRLCRAESSFRYDSGLFVQGLLKDSTGSFVLPFRQVLYAPYPTTHIDVDVNTVKQMAP
CHEHIYNQRRYMMSELTALWKATSDEEMAPDTIVHADETFTPNLNVFQDVGHKDTLVKSF
LDQVFQLKPGLPLRSIFLAQFLLVLHRKALTLIKYIEDETQKGKKPFRSLRNLKTDLDLT
TEGDLNIAMALAEKLKAGLHCFVFGKSFYTSVQERDVLLSF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagctgcccgccacagtccccggctgttccgaagaccgagattgctattgaa
ggggagtccccactgttggctgctacatttgcctactgggacaacatcttgggtcccagg
gtacggcacatttggtcccccaagactgaacagcttcttctgagtgatggcgaaattaca
tttttagccaatcacacactaaatggagaaatcttacgaagtgccgagtacggtgccatt
gacgtgaagttctttgtcctggcggagaaaggagtcattattgtgtccttaatcttcgac
ggggaattgaaagcggacaaaaacacctgtgcgctctccattatactgcctcagacggag
ctcagcttctatttgcctttgcatcgagtctgtgttgacaggctgaagcacattattaga
aagggacggatatggatgcacaagggtcacagcatcatctccctgctgacaacggagatt
attccggttatggagctgctctcctccatgaagtctcacagtgttccagcggaaatcgat
ttaaaagacactttgttgaatgacgatgacattggagacagctgccatgaagacttctta
cacaaggccatcagttcccacttgcaaacgtgcggctgctccatggtggtggggagcaat
ccagacaaagttaataagatcgtcaggactctctgtctgttcctgactcccacggagaga
aaatgttcccgactgtgcagagctgaatcttcattccgatacgactctgggctctttgtg
cagggcctgctgaaggacagcacgggcagctttgttttaccttttcgccaagttctgtac
gcgccttaccccaccacacacatcgatgtggacgtcaataccgtcaagcagatggccccc
tgccacgagcatatttacaaccagaggcgctacatgatgtccgagctcacggcactgtgg
aaggcaacgtctgatgaagaaatggcacctgacacgatcgtgcacgccgatgaaacgttt
actccaaatcttaacgtatttcaagatgtcggccacaaggacaccctggtgaagtctttc
ttagatcaggtttttcagttaaagcccggcctgccactaaggagtatttttcttgctcag
ttcctgcttgtccttcatcgtaaagcactaacactaataaaatacatcgaagatgaaacg
cagaaggggaagaagccattcaggtctcttcgtaatctcaagacagacctggatctgacc
acagagggggacctgaacatcgccatggcactggccgaaaagctcaaagcggggctgcac
tgctttgtctttggaaagtccttctacacgagcgttcaggaacgagatgtactgctgagt
ttttaa
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