Polypterus senegalus (gray bichir): 120532537
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Entry
120532537 CDS
T08668
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00280
Valine, leucine and isoleucine degradation
psex00650
Butanoate metabolism
psex00900
Terpenoid backbone biosynthesis
psex01100
Metabolic pathways
psex03320
PPAR signaling pathway
Module
psex_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120532537 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120532537 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120532537 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120532537 (hmgcs1)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
120532537 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
120532537
NCBI-ProteinID:
XP_039614541
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All DBs
Position
7:50975295..51001952
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AA seq
541 aa
AA seq
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MKGRSVDFSATDCILMIAGFPKMPGSVPASGEACWPKDVGIISMEVYFPSQYVDQAELEQ
FDHVDAGKYTIGLGQAKMGFCSDCEDINSLCLTVVQRLMERNCLSYDCIGRLEVGTETII
DKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAG
DIAVYATGNARPTGGAGAVAMLIGPNAPLAFERGLRGTHMQHAYDFYKPDMASEYPVVDG
KLSIQCYLSALDQCYTVFRNKIHAQWQKEGSDRHFTLKDFDFMVFHSPYCKLVQKSLARL
MLNDFISNLNMNMEDGTFNGLEAFRDVKLKDTYFDRDVERAFMKASAEFFEQKTRSSLLL
SNQNGNMYTPSVYGCLASVFAQYTPQQLAGKRIGVFSYGSGFAATLYSIRVTQDATPDSS
LDKLTASLFDLKSRLDSRRKVSPEKFAEIMSLRQKTHHLADYTPQSSADDLFPGTWYLTR
VDDKHRRHYARQPLNEDGPLEAGIIHSNTAQEHIPSPAKKMPRIPAVAKGAEAVSVTNGD
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggacggagcgtggatttttctgctacggactgtatattgatgattgctggcttt
ccaaaaatgccaggatcagtccctgctagtggagaagcctgttggccaaaagatgttggg
attatttccatggaggtctattttccttcccagtatgtagatcaggcagagcttgaacag
tttgaccatgtggatgctgggaagtacaccattggccttggccaagctaagatgggtttt
tgctcagactgtgaagacattaactctttgtgcctaactgtggtacagagactgatggag
aggaactgtctctcatatgattgtatagggaggctggaagtcggcactgaaactatcatt
gataagtcaaaatccgtaaagactgtgcttatgcagctatttgaagagtctggaaacact
gatgttgaagggattgacacaactaatgcctgctatggaggaaccgcagctctttttaat
gcagttaactgggtagaatccagctcatgggatgggcgttatgctttggttgttgctgga
gacattgctgtctatgctactggaaatgctcggccaacaggtggtgctggtgctgtagca
atgcttattggcccaaatgctccccttgctttcgaaagaggtctgcgtggtacacacatg
cagcatgcttatgatttctataaacctgatatggcgtcagaatatcctgtggttgatgga
aaattatccatccagtgttacctcagtgcattagatcagtgctacacagttttccgaaac
aaaattcatgcacaatggcagaaagaaggcagtgatagacattttactctgaaggatttt
gactttatggtttttcattctccatactgtaaactggtacagaaatcattagcgaggcta
atgctgaatgactttattagcaatttgaatatgaatatggaagatggtactttcaatggc
cttgaggcattcagggatgtaaagctcaaagacacttactttgatcgtgacgtagaaaga
gcattcatgaaagctagtgctgagttttttgagcagaaaactagatcctccctccttctc
tccaaccagaatggcaatatgtacacaccttctgtgtatggctgccttgcatctgttttt
gcacagtacacaccccagcaacttgctgggaaaaggattggagttttttcctatggttca
ggttttgcagcaacactgtactccattcgagtaactcaagacgcaacccctgattcatca
ttggataaacttacagccagtctttttgacttgaaatcacgactagattctagaagaaaa
gtttccccagaaaagtttgctgaaattatgtcacttcggcaaaaaactcaccatcttgct
gattataccccacagagctcagcagatgacctcttcccagggacttggtacctaacccga
gttgatgacaagcaccgcaggcactatgcaagacagccactgaatgaggatggtcctttg
gaagcaggaattattcattccaacacagcacaggagcacatacctagccctgcaaagaaa
atgccgaggattcctgcagttgccaaaggagcagaagcagtttctgttacaaatggtgac
cactaa
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