Polypterus senegalus (gray bichir): 120532709
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Entry
120532709 CDS
T08668
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00310
Lysine degradation
psex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120532709 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120532709 (prdm6)
03036 Chromosome and associated proteins [BR:
psex03036
]
120532709 (prdm6)
Enzymes [BR:
psex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
120532709 (prdm6)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120532709 (prdm6)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120532709 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-H2C2_2
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
120532709
NCBI-ProteinID:
XP_039614942
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All DBs
Position
7:90114069..90235170
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AA seq
599 aa
AA seq
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MINWTHLEMLKPGDPSASAFLKVDPAYIQHWQQLFPQSQLKSASLNPLHPADRADLPVES
LRQRPTSISSNSSSSASTPSSSSSSASSNSSSSSSLAGLAQLNVPQIALFGHAQCTDIIT
TAALGNQSKELCSSSQYKNDRAPRFKFTSEELDYYLYGQQRMEIIPLNNHTSDPNNRCDM
CADNRNGECPMHGPLHSLRRLVGTSSSAASVAPPEIPEWLRDLPREVCLCTSTVPGLGYG
ICAAQRIPQGTWIGPFQGAPLLLDKTISGTARNTRHLWEIYDQEGTLQHFIDGSEPSKSS
WMRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQ
DENLNVPASVMEAMSRHDTLQPFNKTSKAPSAALLRSMVFPHAPCTRNFSLLDKPETGLG
QMNVKNQRVLASPTSTSQLNTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRENKPG
ITCLRSSNWEQMVVYTPEGNLIQPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGR
AFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgataaactggacgcacttggagatgctgaaacccggcgatcccagcgcctctgctttc
ctgaaggtggacccagcctatatccagcactggcagcagctttttcctcaaagtcagctg
aagagcgccagcctgaacccgctgcacccggcggacagagcggatctcccggtggaaagt
cttcgtcagcgtcccacttccatctcgtcgaactcctcctcgtctgcttctaccccgtcc
tcgtcttcctcgtcagcctcctccaattcctcctcctcttcatcgttagctgggttagct
caactgaatgtgccccagattgcactttttggacacgcgcagtgcaccgacatcatcacc
acagcagcactcggcaaccaaagcaaagagctttgttcatcatcccagtacaaaaatgac
agagcgccaaggtttaagtttacatcggaggagttagattattacctttatgggcagcag
agaatggagataatcccactgaacaatcacaccagcgatcccaataatcgttgtgacatg
tgcgcggataaccgcaatggagaatgtccaatgcacggccccctgcactcgcttcggcgt
ctggtgggaaccagcagctcagcggcgtccgtcgcgccccccgagatcccggagtggtta
agggacctaccaagggaggtgtgcctgtgcacgagtacagtacccggactcggctatggc
atatgcgcagcccagaggataccccaaggcacctggatcggaccgttccaaggagccccg
ttgctgctggacaagacgatttctgggacagcaaggaatacgcgacacctttgggagatt
tatgaccaggaagggacattacagcactttatagatggaagtgaacccagcaagtcaagt
tggatgagatatattcgttgtgctcgacattgtggggaacaaaatatgatggtggttcaa
tacaggtcttgtatattctacagagcctgtatggatattccccgtggcactgaattgcta
gtctggtacaacgacagctacacttcgtttttcgggatcccactgcagtgcattgcacaa
gatgaaaacttgaacgtccctgcctccgtgatggaagccatgtccaggcatgacacgtta
cagccctttaacaagacaagcaaggctccttctgcagcactactgcgttcaatggttttc
cctcatgctccatgcacaagaaatttctcgttactggacaagccagaaactgggctcggt
caaatgaacgttaagaaccagcgagtcctcgcaagccctacttcgacgagtcagttgaac
actgaatttagtgactggcacctctggaaatgtggccagtgttttaagacattcactcag
cgcattctgctccaaatgcacgtgtgcacacagaacccggacagggagaacaagcctgga
atcacctgtctgaggagttcaaattgggaacaaatggtggtgtataccccagagggcaat
ctgattcagccttaccaatgtggtcactgctctcagtcattctcccagccctctgagctc
cgaaaccatgtggttacccactcaagtgacagacctttcaaatgtggctactgtggtcgt
gcctttgctggagccaccaccttaaacaaccacatccgcacacacactggagagaagcca
ttcaagtgcgagaggtgcgagcggagcttcacacaagccacccagctgagtcggcaccag
aggatgcccaacgagtgcaagccaataacagagagcacagaatcaattgaagtggattaa
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