Polypterus senegalus (gray bichir): 120534011
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Entry
120534011 CDS
T08668
Symbol
flncb
Name
(RefSeq) filamin-C isoform X1
KO
K27393
filamin-C
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120534011 (flncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120534011 (flncb)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120534011 (flncb)
Intermediate filaments
Intermediate filament-binding proteins
120534011 (flncb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
120534011
NCBI-ProteinID:
XP_039617147
LinkDB
All DBs
Position
8:complement(69473694..69623128)
Genome browser
AA seq
2769 aa
AA seq
DB search
MTSNNAYYDQQPQYYQGTDSGEDQEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVN
KRINDLQKDLSDGLKLIGLLEVLSQKKMYRKYHARPNFRQMKLENVSVALEFLDREHIKL
VSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDEEDAKKQTPKQRLLGWIQNKIP
QLPITNFHRDWQDGKALGALVDNCAPGLCPDWETWDPKQPVENAREAMQQADDWLGVPQV
IAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRSKQLNPKKARAYGPGIEPHGNIVLK
PAEFTVETIEAGLGEVLVFVEDPEGHTEEARVIANNDKNRTYSVTYIPKVAGLHKVTVLF
AGQNIDKSPFMVNISMAVGDANKVSARGPGLEPTGNVANKPTYFDIYTAGAGAGDVGVVI
VDPQGRRDTVEVILEDKGDSIFRCTYRPVMEGPHTIYVTFAGAQIPKSPFTVQISEAPQS
GQPAGAPAIQIIPQSICTPPSEKPKKVPPPTPPKPHRPTCNPNACRATGRGLQPKGVRVK
EVADFKVYTKGAGSGELKVLIKGPRGAEEPVKIREMADGVFECEYYPVIPGKYTVTITWG
GYAIPRSPFEVHISPEAGVQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEGPS
QAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAVNNVFPEKVKA
FGPGLEPTGCIVNKPAEFTIDARGAGKAELKIYAQDAEGFPIDIEIKDNGDNTFFCVYVP
TKPIKHTIIITWGGVNIPKSPFRVNIGEGSHPENVKVYGPGVEKTGLKANEPTYFTVDCS
EAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGRYTIMVLFADQEI
PLSPFRIKVDPSHDANKVKAEGPGLSKTGVEVGKPTHFTVFTKGAGKAKLDVHFAASAKG
EAVKDFEIIDNHDYSYTVRYTAVQQGNMTISVTYGGDPVPKSPFNITVAPALDLNKVKVQ
GLNNKVDVGKDQEFTINTRGAGGQGKVDVKITSPSRRPIPCKVEKETAKDLHTVKYMPPE
EGPYKVDVSYDGNPVPGSPFTVEGVMPPDPSKVRAYGPGLKGGLVGKPAPFAIDTKGAGT
GGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYSINILFAESHIPGSPFKAIIKPV
FDPSKVTASGPGLERGKVNEAGSFTVDCSKAGEAELTIEIISDSGVKAEVHIQNNSDGTY
SITYIPPFHGMYTITIKYGGHAVPKFPAHVQVDPAVDTSGIKVYGPGVEPRGVLREVTTE
FTVDARTLTKTGGNHVKARIVNPSGAKTEAYIQDKGDGTYRVEYTAFEDGIHLIEVLYDD
VTVPKSPFRVGVTEGCDPTRVRAYGPGLEGGLVNKSNRFTVETRGAGTGGLGLAIEGPSE
AKMSCKDNKDGSCSVEYIPFTPGDYDVNITFGGCPIPGSPFRVPVKEVVDPSKVKCSGPG
LGTGVRAHIPQTFTVDSSKAGLAPLEVLLLGPAGVAEPVDIKDNGDGTHTVNYTPAMDGP
YTISVKYADQEVPRSPFKIKVLPTHDASKVRASGPGLNASGVPASLPVEFTIDARDAGEG
LLTVQILDPEGKPKKANIRDNGDGTYTVSYVPDMTGRYTITIKYGGDEIPYSPFRIHALP
TGDASKCLVTVSIGGHGLGTGLGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAELDV
DVVENADGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVACDTIPIIEEPCDMLQLHQ
PYQPYHSGFPSHWATEEPVAPVDGIEPMLRPFNLVIPFTVQKGEITGEVRMPSGKTARPN
ITDNKDGTVTVKYAPTEKGLHEMDIKYDGNHIPGSPLQFFVDAINSGHVTAYGPGLSHGM
VNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYLPTAIGDYNIIVKFD
DKHIPGSPFTAKITGDDSMRTSQLNVGTSTDVSLKITETDLSSLTASIRAPSGNEEPCLL
KRLPNRHIGISFTPKEVGEHVVSVKKNGKHVTNSPFKIMVGQSEIGDASKVKVSGKGLLE
GHTFEVSEFIVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTCKVTYCPTEPGNYIINIK
FADQHVPGSPFTVKVIGEGRMKESITRKRQAPSIATVGSTCDLNLKIPGNWFQMVSAQER
LTRTFTRSSHTYTRTERTEISKTRGGETKREVRVEESTQVGGDPFHDVFGEFLGRESLGT
FSGITRQEGEAGTQEMTAQVTSPSGKTNDAEIIEGEDSTYSVRFVPQEMGPHTVNVKYRG
QHVPGSPFQFTVGPLGEGGAHKVRAGGTGLEKGVAGVQAEFSIWTREAGAGGLSIAIEGP
SKAEISFEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFIVPVATLSDDARRLTVT
SLQETGLKVNQPASFAVQLNGARGVIDAKVHTPSSAVEECYVSELDSDKYAIRFIPHENG
VHSIDVKFNGSHIPGSPFRIRVGEPGQVGDPGLVSAYGPGLEGGATGVPSEFIVNTCNAG
SGALSVTIDGPSKVKMDCNECPEGYKVSYTPMAPGNYLISIKYGGPQHIVGSPFKAKVTG
VRLSGGHSLHETSTVLVETVTKSATMGAYGAMPKFTSDASKVVSRGAGLSKAFVGQKNVF
TVDCSKAGTNMLMVGVHGPKTPCEEVYVKHVGNRMYNVTYTVKEKGDYILIVKWGDENVP
GSPFHVTVP
NT seq
8310 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaataacgcatactacgatcagcagcctcagtactaccagggtactgacagc
ggagaagatcaagaagagatgcctgccacagagaaagacctggcagaggatgcaccctgg
aagaaaatccaacagaatacctttaccaggtggtgcaacgagcacctcaagtgtgtcaat
aagaggatcaacgacttgcagaaagacctgagcgacgggctaaagctgatcgggctctta
gaggttctgagccagaagaaaatgtacagaaaataccacgcaagaccgaattttaggcag
atgaagctggagaatgtttcggtggcactggaatttctggatagagaacacatcaaactc
gtctctatagacagcaaagccatagttgatggaaacctgaaactgattttgggcctaata
tggactttaattctacactattctatctccatgcccatgtgggaagatgaagatgaagag
gatgctaaaaaacagactcccaagcagaggctcttgggatggattcagaacaagatccca
caattgcctatcaccaatttccaccgagactggcaggatggcaaagctttaggagctttg
gttgacaattgtgcaccaggtctgtgtccggactgggagacctgggatccaaagcagcca
gtagagaatgccagagaggccatgcagcaggctgatgactggcttggagtgcctcaggtg
atagcaccagaagagattgttgaccccaatgtggatgaacactcagtgatgacctaccta
tctcaattccccaaagccaagctaaaaccaggtgcccctctcagatccaagcagttgaac
cccaagaaggccagagcctatgggccaggtattgagccccatggtaacattgtactgaag
cccgcagaattcactgtagagaccattgaggcaggtctgggagaagtgctagtgtttgtt
gaagaccctgaagggcatacagaagaggccagagttattgccaacaatgataaaaacaga
acgtattcagtcacatatatcccaaaagtggcaggtcttcacaaggtgacagtgctgttt
gctggccaaaacatagacaaaagtccctttatggtcaatatttctatggctgtaggagat
gctaacaaagtatctgctaggggacctggcctggagcctacaggcaatgttgccaacaaa
ccaacttactttgacatttacacagcaggagctggagcaggagatgttggtgttgttatc
gttgatccccaaggccggcgtgataccgttgaggtcattcttgaggacaaaggagacagc
attttccgttgcacctaccgacctgtgatggaagggccgcataccatctatgtcactttt
gcaggagcccagatcccaaaaagcccatttactgtacaaatttcagaagctccccagtct
ggccaaccagctggtgctccagccattcagattatacctcagtctatctgcactccacca
agtgaaaagccaaagaaagtcccgcccccaactccacctaaaccgcatcgaccaacttgt
aatcccaatgcttgccgtgccacaggacgtggtctacaaccaaaaggggtcagagtaaaa
gaggttgcagatttcaaagtatacaccaaaggagctggtagtggagagctgaaagtgcta
ataaaagggccaagaggtgcagaggagccagtgaaaatccgtgagatggcagatggagta
tttgaatgtgaatattaccctgtaattcctggaaaatacacagtcacaatcacctgggga
ggatatgccatcccaagaagtccttttgaagttcatataagtcctgaagcaggcgttcag
aaggtacgagcctggggtcctggcctggagactggaatggttggcaaatccgcagacttt
gtggtggaggccattggaactgaagttggaactctgggcttttccattgaaggcccatct
caagctaaaattgaatgtgatgacaaaggtgatggctcttgtgatgtacgctattggcca
actgaacctggggactatgctgttcatgtcatctgtgatgatgaagatatcaaagacagt
ccattcatggctcacatattacctgctgtcaataatgtcttccctgagaaggttaaagct
tttggtccaggactggagccgacaggttgcatcgtaaacaaaccagctgaatttactatt
gatgcccgtggggcaggcaaagcggaacttaagatctatgcacaggatgcagaaggattc
cctatcgacatcgagatcaaggataatggagataataccttcttctgtgtttatgtgccc
accaagccaataaagcacactatcatcattacctggggtggagtgaacattccaaaaagt
ccattcagagtcaacattggagaaggtagccacccagaaaatgtcaaagtctatggccct
ggtgtagaaaagactggtctaaaagccaatgaacccacatacttcacagtggactgcagt
gaagccggacaaggtgatgtaagcattggaattaagtgtgcacctggagtggtgggccct
gcagaggcagacattgattttgacattatcaagaacgacaatgacacgttcactgtaaaa
tatactccacctggcgcaggtcgttataccatcatggtgctctttgcagatcaggaaatt
cctctcagccccttccgtataaaagttgatccatcacatgacgccaataaggtgaaagct
gaaggcccagggcttagcaaaaccggtgtggaggttggcaaaccaactcattttactgtc
ttcactaagggtgccggtaaggccaaactggatgtccattttgctgcatctgcaaaagga
gaagcagtcaaggactttgagattattgacaaccatgactactcttacactgtcaggtat
acagcggtgcagcagggcaacatgactatctcagttacatatggtggagatccagttccc
aaaagtccatttaacatcactgtggccccagctcttgatctcaataaagtcaaagttcaa
ggacttaataacaaggtggatgttggaaaagaccaggagtttaccattaatacacgtggg
gctggtggccaaggtaaagtagatgtgaagatcacttctccatcacgtcggcctattcca
tgcaaggttgagaaagaaacagcaaaggatttgcacactgtgaaatacatgcctccagaa
gaaggcccctacaaagtggatgtcagctatgatgggaatcctgttccaggaagtccattc
accgtagaaggggtcatgcctcctgatccttccaaggtacgagcatatggcccaggccta
aaaggtggactcgttggaaagcctgctccctttgccattgatactaaaggtgctggtaca
ggtggacttggacttactgtggaggggccttgtgaggccaaaattgaatgtcaggacaat
ggcgatggttcctgctctgtttcctatctacctacagagcctggagaatattctataaac
atcctgtttgcagagtctcacatcccaggctcacctttcaaagccataataaagccagtg
ttcgaccctagcaaagtcacagccagtggaccagggttggagagaggaaaagttaatgag
gctggctccttcacagtggactgttctaaagctggtgaggcagaactgaccattgaaatc
atctcagattctggtgtgaaggctgaagtgcatatccaaaataacagcgatggcacctat
tctattacctacataccccctttccatggcatgtacacaatcacaatcaagtatggggga
catgcagttcctaaatttcccgcacatgtccaggtggatcctgcagtcgataccagtgga
attaaagtatatggaccaggagtggagccacggggagttcttcgagaagttaccacagaa
ttcacagttgatgctcgaacactgacaaaaacgggaggcaaccatgtgaaagcaagaatt
gttaatccatcaggtgccaaaacagaagcctacatccaggacaaaggagatggaacatac
cgagtagaatatactgcttttgaggatggtattcatcttattgaagtactatatgatgat
gtgacagttcccaagagtcctttccgagtaggcgtcactgagggctgtgaccccacacgt
gtcagagcttatggacctgggctagaaggaggactggtcaataagtccaatcgcttcact
gttgaaacaaggggtgctggtactggaggtctgggtcttgctattgagggtccttcagag
gctaagatgtcttgtaaagataacaaagatggtagctgtagtgtggagtacatccccttt
acaccaggagactatgatgtcaacattacctttggtggatgccccattccaggaagtcca
ttcagagtgccagtcaaggaggttgtggatcccagcaaagtcaagtgttcaggtcctggt
ctggggactggtgtgcgagctcacataccccagacattcactgtggacagcagcaaggcc
ggccttgcaccacttgaagttcttttgcttgggcctgcaggagtggcagaaccagtggac
attaaagataatggagacggtactcatacagttaactataccccagcaatggatggcccc
tacacgatttctgtaaaatatgcagatcaggaggttcctcgcagcccattcaaaatcaag
gttttgcccactcatgatgccagcaaagtccgtgccagtggacctggccttaatgcttca
ggtgttccggccagcttgccagtagagttcactatagatgctcgagatgctggagaaggc
cttctcactgtccagattcttgatcctgaagggaaaccaaagaaagcaaacatacgggac
aatggagatggaacctacacagtgtcatatgtgcccgatatgactggccgttacactatt
accattaaatatggtggcgatgaaatcccatactctcccttccgtattcatgcacttcca
acaggagatgccagcaagtgtttggtgacagtatccattggcggacatggtttaggtact
gggctaggacccaccattcagattggagaagaaacagttatcactgttgatgcaaaagct
gctggaaaaggaaaagtaacatgcaaagtgtccacccctgatggagctgagctagatgtg
gatgtggttgaaaatgcagatgggacctttgatatttactacacagcaccagagcctgga
aaatatgttatcactatccgttttggaggggagcacattccaaacagcccattccacgta
gtggcgtgtgacaccattcccattattgaagagccatgtgacatgctgcagttacatcag
ccataccaaccgtaccacagtggctttccttcacactgggccacagaggaacctgttgcc
ccagttgatggcatagagcccatgctcagacctttcaatttggtcatcccctttactgtc
caaaaaggagagataacaggagaagtacgcatgccatcaggtaaaactgccaggcctaat
atcactgataataaagatggaacagtcactgtaaaatatgcaccaacagagaaaggacta
catgagatggatattaaatatgatggaaatcatattccaggaagtccattgcagttcttt
gtcgatgctattaacagtggccacgtaacagcctatggacctggcttaagccatggaatg
gtgaacaaaccagccactttcaccattgtaaccaaggatgctggtgaaggcggtctgtcc
cttgctgtggaaggaccatcaaaggcagaaatcacttgtaaggacaataaagatggcacc
tgcactgtttcctacctgccgactgcaattggagattacaacatcattgtcaagtttgat
gacaagcacatccctggaagtccgttcactgctaagattacaggtgatgattcaatgagg
acatcccagctcaacgtaggcacatcaacagatgtctctctgaagattacggagacagat
cttagttcattaacagcaagtatccgtgcaccatctggtaatgaggaaccttgccttctg
aaaagactgccaaacagacatattggaatttcattcaccccaaaggaagttggagagcat
gtggtcagtgttaagaagaatggtaaacatgttactaacagtccctttaaaatcatggtt
ggacaatcagaaatcggcgatgccagcaaggtgaaggtttcagggaagggcctgctggaa
ggtcacacttttgaggtgtccgaatttattgtggacactcgaaatgccggctatggaggc
cttggtttgtcaattgaaggtcccagcaaagttgatataaattgtgaagatatggaagat
ggaacatgcaaagttacttactgccccactgagccaggcaattacatcatcaacattaaa
ttcgctgaccaacatgtaccaggaagcccatttacggtgaaggtgattggtgaaggacgt
atgaaagagagcatcaccagaaagagacaagcaccatccattgccacagttggcagcact
tgtgatttaaatcttaaaattccaggaaactggttccagatggtgtcagcccaggaacgc
ctgacacgtacttttacacgcagcagtcacacctacacacgtactgagcgcactgagatc
agcaaaacgaggggaggggagaccaagagggaggtgagggtggaggaatccacgcaagtt
ggcggagacccattccatgatgtcttcggagagtttctcggccgagagagccttgggaca
ttcagtggcattacaagacaagagggagaagctggcacccaagaaatgactgcacaagta
accagtccttctggcaaaaccaatgatgctgaaattattgagggagaagacagcacctac
agcgtgcgctttgtgcctcaggagatgggtcctcacacagtgaatgtcaagtatcgtggg
cagcatgtcccaggcagtccctttcagttcacagtggggccacttggagaagggggtgcc
cacaaggtcagagcaggtggcactgggctggagaaaggagtggcaggagttcaagctgag
tttagcatctggacaagagaagctggtgctggtggtctatccatagcaattgagggtcca
agtaaagctgaaatttcatttgaagataggaaagatgggtcatgtggtgtatcatatgtt
gttcaagagcctggtgattatgaagtttcaatcaagtttaatgatgaacacatcccagac
agccctttcattgtgccagttgccactctgtctgatgatgcaagacgactcacagtaaca
agcttacaggaaactggattaaaggtcaaccagccagcatcttttgcagtacagttgaat
ggagccagaggagtgattgatgccaaagttcacacgccttctagtgcagtggaagaatgc
tatgtctctgaactggacagtgataagtatgcaatccggttcattccacatgaaaatggt
gtgcactccatagatgtgaagttcaatggcagtcacatccctgggagtccttttagaatc
cgagtgggagaacctggtcaagtgggagatcctgggcttgtctcggcatatggtccaggc
cttgaaggcggagctacaggtgtgccttcagagttcattgtgaatacgtgcaatgcaggc
tctggagcattgtcagtgactatcgatggcccctcaaaagttaagatggactgtaatgaa
tgtccagaggggtacaaagtctcatacacaccaatggctcctggcaactatcttatatct
atcaaatacggtggccctcaacacattgtaggaagcccttttaaagcaaaggtgacaggt
gttcgcttgtccggtggtcacagtttacatgaaacatcaacagtgctggtggaaaccgta
acaaagtcagccaccatgggtgcttatggtgccatgcctaaatttacctctgatgccagt
aaagttgtatctcgaggtgctggtctctccaaagcctttgtaggacagaaaaatgttttt
acagtagactgcagtaaagcagggactaatatgctaatggtaggagttcatggtcctaag
acaccgtgtgaagaagtctatgtgaaacatgtaggaaacagaatgtacaatgtaacatac
acagtcaaagaaaaaggggactacatccttattgtgaaatggggggatgagaatgtacca
ggaagccccttccatgtcactgtgccttaa
DBGET
integrated database retrieval system
