Polypterus senegalus (gray bichir): 120534124
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Entry
120534124 CDS
T08668
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120534124 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120534124 (irf5)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120534124 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
120534124
NCBI-ProteinID:
XP_039617364
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All DBs
Position
8:90234510..90314685
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AA seq
490 aa
AA seq
DB search
MSIQPRRIRLKPWLIAQVNSGNYPGLQWISHEQKLFQIPWRHATRHIPTPEDDNTVFKAW
ALETGKYKEGFDEPDPAKWKANFRCALNKSREFKLKYDGTKKTPVEPFKIYEVCDQHSSE
DQLEDEDADDMILDLRELNIDSTVPSYLESKQERLYLNSISQPEQLNPAASNLSAIEDGS
FETLSTVPISMQYSEMISADFVHGEFEPNNVIQGAINHQVVHGAIDHGVIPAIPAPEGQP
QMCINDLLISPHMLPLTDLDIKFQYRGRQAGSLTVSNPQGCRLYYGNLEPTPDQVDLFGP
VTLQQVLFPDPAEIPNQKQMYYTNQLLDVMDRGLILEINGQDIYAIRLCQCKVYWSGPGV
FELSGPNPIEREKKIKIFSLNSFLQELILYQKGETNAPPPFEIYFCFGEVWPDRKPKEKK
LIIVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDLKDQTVEQFKELHRLWQHHQTQG
QWAMQPATMH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcagcctagacgaattcgactaaaaccttggctgattgcccaggtaaacagt
ggaaattatccaggtctgcaatggataagccatgagcaaaaacttttccagataccctgg
cgacatgcaactcgtcatatacccacacctgaggatgacaatactgtcttcaaggcatgg
gctttggaaacaggaaaatacaaagaaggatttgatgaaccagatccagctaaatggaaa
gctaattttcgatgtgcactcaataagagcagagagttcaaacttaagtatgatggaaca
aagaaaaccccagttgaaccttttaaaatatatgaagtttgtgatcagcattcaagtgaa
gatcagttagaagatgaggatgcagatgacatgatcctagatttacgtgagcttaacatt
gattcaacggttccttcttatttggaaagcaagcaagaaagactctatctcaacagcatt
tcacaaccagaacaattaaatcctgctgcttccaacctcagtgccatagaagatgggtcc
tttgaaacactttctacggtacccattagcatgcagtattcagaaatgatatctgcagat
ttcgttcatggagagtttgaacctaataatgtcattcaaggagctataaatcatcaggtt
gttcatggtgctatagatcatggagtcattcctgcaatcccagcaccagaaggccagcca
caaatgtgcataaatgacctgcttatcagcccacacatgctgccattgaccgacttggac
ataaaattccagtatagaggaaggcaagctggatctttgactgttagcaaccctcagggc
tgccgactgtattatgggaacttggagcccacacctgatcaagttgatttgtttggacca
gtaactctgcagcaagttctatttccagaccctgcagagattcccaatcaaaaacaaatg
tattatactaatcaacttctggatgttatggaccgtggactcattcttgagataaatgga
caggatatctatgccatccgtctgtgccaatgcaaagtatattggtctggaccgggtgtt
tttgaactgtctggaccgaatcctatagaaagagaaaaaaagatcaaaatcttcagtttg
aacagcttcttacaagaacttattttgtaccagaaaggggagacgaatgcacctcctcct
tttgaaatttatttctgttttggagaagtctggcctgacaggaagccaaaagaaaagaag
ctcatcattgttcaggtcgttccagttgtggctcggattcttaccgagatgttttctggt
gaactgtcttggtcaactgatagcatccgtctgcagatctcaaatcccgacttaaaagat
cagactgtggaacagtttaaagagctgcaccgattatggcagcaccatcaaacccaggga
cagtgggcaatgcagccggccacgatgcactga
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