Polypterus senegalus (gray bichir): 120535343
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Entry
120535343 CDS
T08668
Symbol
adamts18
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 18
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120535343 (adamts18)
Peptidases and inhibitors [BR:
psex01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
120535343 (adamts18)
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
Reprolysin
ADAMTS_CR_2
Pep_M12B_propep
TSP1_spondin
PLAC
Reprolysin_5
TSP1_CCN
Reprolysin_2
ADAMTS_CR_3
Reprolysin_3
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
120535343
NCBI-ProteinID:
XP_039619050
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All DBs
Position
9:complement(56894473..57054870)
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AA seq
1217 aa
AA seq
DB search
MDCVFLLLWTLAIPLLSRNSVKVLSALWFGDVFKTFQICCCYSDFSTAFGSQRSEVNDDM
VFVIPSEVDSNGAFISHDILGSSRKRRSLPHRHNLTVHYKLSAFGKELLLDLKPSNVIAN
GFTIQTLGRDGVTTLQEPRFENCFYQGLIRNHSISSAAISTCTGLSGLIRIQDDEFLITP
LPQHLAKKHSITSQPGQHTHVLYKRSAEAIVQDKSLHGIPHYHHQSNLYKKKKQHGMYQM
DHFCGRHKKYYPKPPIERLNQEYEQMNRPKRSPFSSVKPGGLNVETLVVADQKMLEKHGK
ENVTTYVLTVMNMVSSLFKDGTIGTDINIVVVSLLLLEQDPVGLVVNHHADQSLNSFCQW
QSGLSGKNGKRHDHALLLTGLDICSWKNEPCDTLGFAPISGMCNKYRSCTINEDTGLGLA
FTIAHESGHNFGMVHDGEGNACRKAEGNIMSPTLAGNNGVFFWSACSRQYLNKFLSTAQA
SCLIDEPKQIGKYTFPDKLPGQLYDADMQCKWQFGSKAKLCNLDFVKDICKSLWCHRSGH
RCETKFMPAAEGTLCGHNMWCRRGQCVKFGDHGPKAVHGQWSQWSEWSDCSRTCGTGVMY
RERLCNNPKPQYGGKFCIGSSRLYQLCNTKACKNNIEDFRAQQCAEYNSKPFRGWYYKWK
PYTKVEEEDICKLYCIAENYQFFFAMSNKVKDGTPCSESQLDVCIEGICEQVGCDHVLGS
KAELDACGVCNGSNSTCAFFRGQYLQQHSANEYYSVIVIPAGARSIHIHEMEVSTSYLAV
RNLKKKYYLTGNWIVDWPGKFSFAGTVFDYQRPVHQPETLFASGPTNESLVFEVLLQGKN
PGIAWEYTLPKNDNKNTNKKDNYTWVVIRSNCSASCAGGQISTKAVCLQNNRIQVNSSFC
SSHVRPTFRTRVCNTQPCPAYWYTGEWSTCSQSCGGGQQSRQVQCMRRVAFQREEVVAHS
LCSASMPAKLQTCNNQACQPEWISGAWSQCSKTCGRGVRVREVYCTNSNPSAKGKGLPDS
LCNQDQKPKSQETCVLRRCPRNDKLQWMTSAWSECSITCGPGIEKRELKCCEKDANGKIT
EFPVRRCRNLPKPAVDLQQACNKGECEEPNSSNGRTLNNVGWYSSPWQQCTVSCGGGVQT
RHVQCLRQGRPSSRCLSHLQPITSRACNTNFCPAPKRKEEILCKDIFSWCHLVPQHGVCN
HKFYGQQCCKSCAQVKQ
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggattgtgttttccttttgctttggacactggccattccgttgctaagccgcaattct
gtgaaggttttatcagccctgtggtttggggatgtgttcaagactttccagatctgttgc
tgctattcagacttttcaactgcttttggaagtcaaagaagcgaggtgaatgatgatatg
gtgtttgttatacccagtgaagttgattccaatggagccttcatttctcatgacattttg
ggaagcagcagaaaaaggaggtcactgccacatcggcacaatcttactgtgcactacaag
ctgtcagcatttggaaaggaacttcttttagatttaaagccttccaatgtaatagcaaat
gggtttacaatccagacattgggcagagatggagtgaccacattacaggagcccagattt
gaaaactgtttttatcagggattaattaggaaccacagcatttcctcagctgcaatatca
acatgtacaggcttgtcaggtttaataaggatacaagatgatgagttccttattacacct
ttacctcagcatctggcaaagaagcacagcattacttctcaacctggacaacatactcat
gtgctttacaaacgatcagctgaagccattgttcaagacaaatccttacatgggattcca
cactatcaccatcaaagtaacctgtacaagaaaaaaaaacagcatggaatgtaccagatg
gatcatttctgtggacggcacaagaaatattatcctaagcctccaatagaaagacttaat
caagaatatgaacaaatgaacaggcctaagagatctcctttcagttctgttaagcctgga
ggcctcaatgtggagacactggtggtggcagaccagaaaatgctggaaaaacatggcaaa
gagaatgttactacatatgtgctgacagtcatgaacatggtttccagtctgttcaaagat
ggaactatcggaacagatattaatattgttgttgtaagtcttcttcttcttgaacaagat
ccggtagggttggtggtaaaccaccatgctgaccagtctttaaacagtttttgtcaatgg
cagtcaggactgtctgggaaaaatggaaaacgccatgaccacgctttactactcactggg
ttagacatatgctcatggaagaatgagccatgtgacacactgggttttgcaccaataagt
ggaatgtgcaataaatatcgaagttgcacaataaatgaagacactggacttggtctggct
ttcacaattgctcatgaatctggtcacaattttggcatggtacatgatggtgaagggaat
gcatgcagaaaagctgaaggcaatatcatgtctccaacattggctggaaataatggtgtt
ttcttttggtcagcctgcagtcgtcaatatctaaataaatttcttagtacagctcaagct
tcatgtcttattgatgagccgaaacaaattggaaagtatacatttccagacaagctccca
ggacagttgtatgatgcagacatgcaatgtaaatggcagtttggctcaaaggcaaaactt
tgcaatttggactttgttaaggatatatgcaaatcactgtggtgtcatagatcaggccat
aggtgtgaaactaagtttatgccagcagcagaaggtacattatgtggacacaacatgtgg
tgtcggagaggtcagtgtgtgaaatttggagaccatgggcctaaagcagtgcatggacag
tggtctcagtggtcagaatggtctgattgctctaggacttgtggaacaggtgtcatgtac
agagaaagactatgcaacaaccccaaaccacagtatggtgggaaattctgtataggctcc
agtcgcttataccagctgtgtaatacaaaagcatgcaaaaacaacattgaggatttccgt
gctcagcagtgtgcagaatataacagcaaacctttcagaggctggtactacaaatggaag
ccctatacaaaagtggaagaggaagacatttgcaaactctattgcatagcagaaaactat
cagtttttctttgcaatgtcaaacaaagtaaaagatggcaccccctgttctgaaagccag
cttgacgtgtgcattgaaggaatctgtgagcaagtaggatgtgaccatgtccttggctca
aaagctgaactggatgcttgcggtgtttgtaatggaagtaattcaacatgtgcattcttc
agaggacagtatttacaacagcacagtgcaaatgagtattattcagttatagtgattcca
gcaggagcccgtagcattcacatacatgaaatggaagtatctacaagttatctggcagtc
cgtaatctcaaaaagaaatactatcttactggtaactggatagttgattggcctggaaaa
ttctcatttgctgggacagtgtttgactatcaacgccctgttcaccaacctgaaaccttg
tttgcatctggccccactaatgagtctctagtgtttgaagttctcctgcaaggcaaaaac
cctggtattgcctgggaatacactctgcccaagaatgacaataaaaacacaaataaaaaa
gacaactacacctgggtggtcatcagatcaaattgctcagcatcttgtgctggtggtcaa
atttcaactaaggctgtctgcttacaaaacaatcgaattcaagtaaactcctctttctgc
agttcacacgtaagaccaactttcaggaccagagtttgtaatactcaaccttgcccagca
tactggtacactggagaatggagcacttgcagtcagtcctgtggtggaggtcaacagtca
cgtcaagtgcagtgcatgcgaagagttgcatttcaaagggaggaggtggtggcacactct
ctgtgctctgcttctatgcctgctaagttacagacttgcaacaatcaggcctgtcaacct
gaatggatttcaggagcttggtcacagtgttccaagacttgtgggagaggtgttagggtg
cgtgaagtctattgtacaaactccaatccatcagcaaaaggaaaaggccttcctgacagt
ttgtgtaatcaagatcagaagcccaagtctcaagaaacatgtgttcttaggcgctgccca
aggaatgacaaacttcagtggatgacatcagcgtggagcgagtgttctataacctgtggc
ccaggcattgaaaaaagggagctaaaatgttgtgaaaaagatgctaatggcaaaattaca
gagttccctgtaagacgatgtcgcaacctaccgaagcctgcagtggatcttcaacaagcc
tgcaataaaggagaatgcgaagaaccaaattcctccaatgggagaactcttaataatgtt
ggatggtattcatctccttggcaacagtgtactgtttcctgtggaggaggcgttcagact
cgtcatgttcagtgtcttaggcagggaaggccatcatctaggtgcctgtctcatctacag
cctataacatccagagcttgtaacacaaacttctgcccagctcctaagcgtaaagaagaa
atcctgtgcaaagacattttcagttggtgccacctggtgccccagcatggagtttgcaac
cacaagttttatggacaacagtgctgcaagtcctgtgctcaagtaaaacaataa
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