KEGG   Polypterus senegalus (gray bichir): 120536924
Entry
120536924         CDS       T08668                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03420  Nucleotide excision repair
psex04110  Cell cycle
psex04114  Oocyte meiosis
psex04120  Ubiquitin mediated proteolysis
psex04141  Protein processing in endoplasmic reticulum
psex04310  Wnt signaling pathway
psex04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120536924 (rbx1)
   04120 Ubiquitin mediated proteolysis
    120536924 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120536924 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    120536924 (rbx1)
   04350 TGF-beta signaling pathway
    120536924 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120536924 (rbx1)
   04114 Oocyte meiosis
    120536924 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psex04121]
    120536924 (rbx1)
   03400 DNA repair and recombination proteins [BR:psex03400]
    120536924 (rbx1)
Enzymes [BR:psex01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     120536924 (rbx1)
Ubiquitin system [BR:psex04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   120536924 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     120536924 (rbx1)
   Cul2 complex
     120536924 (rbx1)
   Cul3 complex
     120536924 (rbx1)
   Cul4 complex
     120536924 (rbx1)
   Cul7 complex
     120536924 (rbx1)
   Cul8 complex
     120536924 (rbx1)
   Cul9 complex
     120536924 (rbx1)
DNA repair and recombination proteins [BR:psex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120536924 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120536924 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 120536924
NCBI-ProteinID: XP_039621436
LinkDB
Position
10:22155262..22160947
AA seq 108 aa
MAAAMDVDTPSGANSSASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggacgtggataccccgagcggcgccaacagcagcgctagcaagaaa
cgctttgaagtgaaaaagtggaatgctgtagcactttgggcttgggatattgttgtggac
aattgtgccatctgtaggaatcatataatggatctttgtattgagtgtcaagccaatcaa
gcttctgctacctcggaggagtgcacagttgcatggggagtatgtaatcatgcatttcat
tttcactgtatttcccgctggctgaagactcgacaagtctgtcctctggataatcgggag
tgggaatttcagaagtatggacactag

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