KEGG   Polypterus senegalus (gray bichir): 120538099
Entry
120538099         CDS       T08668                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120538099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psex03000]
    120538099
   04121 Ubiquitin system [BR:psex04121]
    120538099
   03036 Chromosome and associated proteins [BR:psex03036]
    120538099
Enzymes [BR:psex01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     120538099
Transcription factors [BR:psex03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    120538099
Ubiquitin system [BR:psex04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120538099
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120538099
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120538099
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD JmjC F-box PHD Cupin_8 PRKCH_uORF2
Other DBs
NCBI-GeneID: 120538099
NCBI-ProteinID: XP_039623463
LinkDB
Position
10:172298502..172379737
AA seq 1296 aa
MEQEAKLRYSKRLRSGTRRRYQDDGISDDEIEGKRTFDLEDKLLSNNYSANFVHIMEGKD
FSIEYIQREGLRTPLVFTNSEGLGLKMPGEDFSVNDVKYFVGSRRMIDVMDVTTQKGIEM
SMAQWRRYYETPPEERDKLYNVISLEFSHTKLENLVQRPASVDKIDWVDNMWPRHLKERQ
RDSTNAIFDMKYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHVLKGGKVFWLIPPTPQNL
ELYENWVLSGKQGDIFLGDKALECQRIQLKQGYTFMIPSGWIHAVYTPVDTIVFGGNFLH
SFNIPMQLHIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYSMTKKSFLTVEFQRESLGI
GLEPEVNGNLHNGDAFDDGEHEDKSPESGSPEDGGGGGGGGIKDESGNSWIHLTAFELEG
LKNLVGKLESLPSNKKCIPAGIQNPDGLLIEMKKLLEEHSNDDLELACTGIPIVKWPKRP
PSYQPPTPLPVGRPKMNIYPTGSRPVRSNLGGGSRSSVSVLRRRRVRCRKCAACTRRECG
ECNFCRDMKKNGGPGRLKQSCVLRQCLSPGLPLSAVCAACNEGTQDPEEATDLSLTLMEC
SSCSEIMHPKCIDVPGEGEINKDLLNCWVCPKCVLARREESQTESEEDSASPASPASADL
SASTIDYDKRGLRGSNSESRVGGKLTASHTDGRRRHLLHNAINQNPASAAGQRHRRLTPA
QQQYQEYLQQRKRKLHTTTSLELRHKKKMKLEREKLFLQARRKAYEVGSRYSRLKILRPL
RSREDSSGTASSSLGGSAISRTRMNSSSSKRGRGMSTRSCDRGKNEGVSRYPTKASSARM
DSRENLSLRSARFRRRQEQLQSSVPTGATGVPNKQGQVIIQGKENRPNQTQGMSADEECL
DSDGDMSTEPTVVIADLGEELERARLKGSYLTVTLQRPPKAFNGSSIVPKLQAIPHCPSG
TQGSLRKHPRVIPRLEADNEMDDVQDQDSETYCTGSALNGSPPGASNGGIAMKGISLSSR
GIIDDCRDPTMQKEIWMSVFRYLTRKELCDCMAVCKTWYKWCCDKKLWMKIDLSRCRSIS
PQALSGIIKRQPIMLDLSWTNISKKQLAWLINRLPGLKDLILAGCTWSSISALSTSSCPL
LRTLDLRWAEGVKDSQIRDLLTPPGADNRSKLRNMVSFRLAGLEITDATLRLIIRHMPLL
ARLDISHCTYVTDQSVNLLTAVGSSTRNSLTEINLAGCNKLTDQCLVFLKRISNVTLIDL
RGCKGITRRACEQFISDLSINTLYCLSDEKLIQKIG
NT seq 3891 nt   +upstreamnt  +downstreamnt
atggagcaggaagccaaattgcgctacagcaagcgactgcgttctggcacccgacgccgc
taccaggatgatggaatatcagatgatgaaattgaaggaaagagaacctttgacctggaa
gacaaacttcttagtaacaactactctgccaactttgtccatattatggaaggcaaagac
ttcagcattgagtacatacagagagaagggctccgaacacctttagtattcacaaattct
gagggcctgggactaaagatgcctggcgaagacttcagtgtgaatgatgtaaagtatttt
gttggcagccgacgcatgattgatgtgatggatgtaacaacccaaaaaggaattgaaatg
tccatggcccaatggaggaggtattatgagacgccaccagaggagagggacaagctttac
aatgtaattagccttgaatttagccacacaaaactggaaaacctggttcaacgtcctgca
agtgtggacaagattgactgggtggacaatatgtggccacgacatctaaaggaaaggcaa
agggactcaactaatgctatatttgacatgaagtatccaaaggtgcagaagtattgcttg
atgagtgttcaggggtgctacacagacttccatattgattttggaggtacatctgtctgg
taccatgtccttaaagggggtaaggttttttggctgattcctcctactccacaaaacctt
gagctgtatgaaaattgggtcctctctggtaagcaaggtgatatttttctgggagacaaa
gcattagaatgccagcgcatacagctgaagcaaggctacacatttatgattccttcagga
tggattcatgcagtgtataccccagtggacactattgtatttggaggaaattttcttcac
agctttaacattcctatgcagttgcacatctacaacatagaggacagaacacgggtgcca
gctaagtttcgatacccgttctactatgagatgtgctggtatgtgcttgagcgatacctt
tacagcatgaccaagaaatcatttctcactgtggagtttcagagagagtccctgggcatt
ggtttagaacctgaagtaaatggaaatctacacaacggcgatgcctttgatgatggagaa
cacgaagataaatcgccagaaagtggttctccagaagatggaggagggggtggtggtggt
ggcatcaaagatgagagtggtaatagctggatccaccttaccgcatttgagctggagggc
cttaagaacctggttggcaaactagaatcccttccttcaaataagaagtgtattcctgca
ggcattcagaatccagatggattgctgattgaaatgaagaaattgttagaggagcatagt
aatgatgacctggaattagcctgtacagggatcccaattgtcaagtggcctaagaggccc
ccctcctatcagccgcctacccccctcccagtggggcgacccaagatgaatatatatcca
actggctccaggcctgttcggtctaacttggggggtggctcccgtagcagtgtatctgtg
ctacgacggcgaagggtgcggtgtcgaaagtgtgcagcttgtacccgccgggagtgcggt
gaatgtaatttctgccgtgacatgaagaagaatggaggcccaggccgccttaagcagtca
tgtgtactgcgtcagtgtctttctccggggctaccactttctgcagtctgtgcagcttgt
aatgagggcacccaagatcctgaggaggcaactgacttgtcactgaccctaatggaatgt
tcttcctgctctgaaattatgcatccaaagtgtatagatgttccaggagaaggcgaaata
aataaagatctacttaactgctgggtttgtcccaagtgtgtcttagccagaagggaagaa
agccaaacagagtctgaggaagacagtgcgtcccctgccagccccgcttcagctgacctc
tccgcttcaacgattgattatgacaagcggggccttcgtggaagcaactctgaatcccgt
gttggaggaaagctgacggctagtcacacagatggcagacgccggcacctacttcacaat
gccataaaccagaatcctgcatcagctgcagggcagaggcatcgtcggcttacaccagca
cagcagcagtatcaggagtacctgcagcaacggaagaggaagctacatacaaccacaagt
cttgagcttcgacacaaaaagaagatgaaactggaaagggaaaagctgttcttgcaagct
aggaggaaggcttatgaagtaggctcacgatactccaggctgaagattttgcgacctcta
agaagcagggaagattccagtggtactgcctcatcttctctgggaggatctgctataagc
cgaacaagaatgaattcctcgtccagtaaaaggggtagaggaatgtccactcgttcctgt
gaccgaggcaaaaatgagggagtgtcacgttatccaacaaaagcttcatctgcccgcatg
gattccagggagaatctaagtttacgaagtgccagattcaggaggcggcaggagcagctg
cagtcaagtgttcccacaggtgctacaggggtgcccaataagcaaggacaggttattatt
cagggcaaagagaaccggccaaaccagacacagggaatgtcagcagatgaagagtgcttg
gacagtgatggtgacatgagcacagagcccacagtagtaattgctgacctaggagaggaa
ttggagagggcacgactcaaaggctcttatctgactgtcacattacagagacctccaaaa
gcttttaatgggtcatctattgtacccaaactccaagccataccccactgtccttccggc
acgcaaggctctctgagaaagcacccgcgagtaattcccaggctggaagcagataatgaa
atggatgatgttcaggatcaggattctgagacatattgcacagggtcagcgctcaacggg
tcacctccaggagctagcaatgggggcattgctatgaaaggcatctctctctcttcacgt
ggaatcattgatgactgtcgggatcccactatgcagaaggagatatggatgtcggtattt
cgctacctcacccgcaaagagctctgcgactgcatggctgtctgcaaaacctggtacaaa
tggtgctgtgataagaaactgtggatgaaaattgatttgagcaggtgccgatctatcagc
cctcaagcactcagtggtattattaaaagacaaccaatcatgcttgacctcagctggacc
aacatctccaaaaagcagcttgcttggcttatcaatcgccttccaggtttaaaggatttg
atccttgctggttgcacttggtcgtctatttcagctctcagcacttctagctgccctctc
ttacgaactcttgatttacgatgggcagaaggggtgaaagactctcaaatacgagatttg
ctaacaccgccaggtgcagacaaccggagcaagcttcgtaatatggtgtctttccgccta
gctggtcttgaaattacagacgccacacttcgcctgattattcgacacatgcccctgctg
gctcgcttggatatcagtcactgtacctacgtaactgaccagtctgtgaacctgctgact
gctgtgggctcatcaacaaggaattctctcacagagatcaacctggctggctgcaacaag
ctaacagatcagtgcctagtattcctcaaacgcatctccaatgtgactcttattgatctg
cgtggttgcaaggggattacacggcgggcctgtgaacagttcatttcagacttgtccatc
aacacactgtactgcctaagtgacgagaagttaatccagaagataggctag

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