KEGG   Polypterus senegalus (gray bichir): 120539152
Entry
120539152         CDS       T08668                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04145  Phagosome
psex04514  Cell adhesion molecules
psex04672  Intestinal immune network for IgA production
psex05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120539152
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120539152
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120539152
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120539152
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psex04147]
    120539152
Exosome [BR:psex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120539152
  Exosomal proteins of epithelial cells
   120539152
  Exosomal proteins of breast milk
   120539152
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2
Other DBs
NCBI-GeneID: 120539152
NCBI-ProteinID: XP_039624893
LinkDB
Position
11:69621161..69673534
AA seq 246 aa
MTGRKINNIFLLLITFLFGVTYTFTQKVPHKDINLVACQSGVSETEDEMGLDGDEILHVD
FDKKETIIMLPKFTGQIIYPTWEQMAEANKQVCLNNLNVSIKAEGAVQEEKDPPRVMVFP
ENDLVKGEPNTLICFVTDFHPSAIKVSWTKNGLPVSEGITLSQYYPNEDFTFRIYSYLSF
TPQLGDLYTCSVEHSALSEILTKFWEPEMKSDSDFGPTIFCAVGLTFGLLGVVTGTFFLI
KGNNCS
NT seq 741 nt   +upstreamnt  +downstreamnt
atgacaggaagaaagattaacaatatttttctgcttctgataacttttctttttggagta
acatatacattcacacagaaagtgccacataaagacattaatttagttgcttgtcagtct
ggtgtctcagaaacggaggatgaaatgggattggatggagatgaaattctgcatgttgac
tttgataagaaagagacgatcataatgcttcccaaattcacaggacaaataatttaccct
acatgggaacaaatggctgaagcaaacaagcaggtctgcttaaacaacttgaatgtatca
attaaagctgaaggtgctgtacaagaagagaaagaccctcctcgtgtgatggtttttcca
gaaaatgacctggtgaagggggagcccaatactcttatctgctttgtcactgattttcac
ccttcagccattaaagtcagctggaccaagaatggtctaccagtgtctgagggaatcaca
cttagccaatactaccctaatgaagatttcacttttagaatttactcttacctcagcttc
acacctcaattaggtgatctttatacatgtagtgtggagcacagtgccctttccgagatt
cttaccaagttctgggaaccagagatgaagtcagattctgattttggaccaactatattt
tgtgcagtaggtctgacttttggactgctaggagttgtgactggaaccttctttctgata
aaaggaaacaactgcagctga

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