Polypterus senegalus (gray bichir): 120539556
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Entry
120539556 CDS
T08668
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120539556 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120539556 (lemd3)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120539556 (lemd3)
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Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
MpPF26
Motif
Other DBs
NCBI-GeneID:
120539556
NCBI-ProteinID:
XP_039625670
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Position
11:143287847..143337102
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AA seq
874 aa
AA seq
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MAAAQLTDEELLAELKRLGCSPGPVTESTRPVYLKKLKKLREEQQKGSRANKTRSVGAAG
ASAPGARPASRDVTRMSASGGRSSGGRLALNKEYLETASKPLLGFSSDESDAEVNQKGDL
NSTSSRRRDRSSGQHHYHHYYYEQLRPAFPSNRNQRLDVSSDPNFDNLEGKKSREGSPFW
LGKRKCTTDLFYSTEPLVNGEINEEDEREQRNGRGLNSSRFVYSCSKPQEEYSDSEEDRD
EEDDMQKQHHPRSRRLSPRRSLTPSELSAHKSARGLENCQERTGGGVSAMRDKYPERSLD
EVESIDWRGSAIGSISESASRRPPYSERKADLPSNVMLSSPTLDSNHVDLGSYSSFTKPR
VSIYNSFSGATTTTTSSSCGNASVRTNHSNHTISNHVTCKVPQSKKLTEPEEELLQQFKG
EEVSATSGVSAHYLSMFLLTAACLFFVLLGLLYLRMRGSGSVETAVAIKSHPFGSDFDRS
YGDKEKSAILNILLHLHDHLAKIAGEHDCGDHLYSGSRNLTFKEASDFLSVQNISSEENL
SAALEWIIKSGESAAGIRLIGRTQDEDVKVVSDIKYLESTHPNMSFICRFRRAFVVVIHR
MLLFVLGIGIVLCILWYMKYRWKKEAEETKQMYDMVGKIIDVLRSHHEACQENKDLQPYL
PIPHVRDSLIKPQDRKKMKKVWDRAVHFLSTNESRMRTQTERIGGADFLVWKWIQPSLAC
DKIPSKVWQGKAFPLDKRNSPPNSLTPCLKIRNMFDPVMEVGETWDLAIHEAILEKCSDN
DGIVHIAVDKNSREGCVYVKCLSAEHAGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQ
ALNCSTPLKPSDNFLNTVSHLRHRTSTINSVAKS
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgcagctaacggatgaagagctcttagctgaacttaagcgactcggttgt
tcccccggtccggttaccgagagcactcgaccggtatatttgaaaaagttgaagaagcta
cgagaagagcaacagaagggtagtagggcgaacaaaacgagaagcgtcggcgcggcggga
gcgtctgcgcctggagccaggccggccagccgtgacgtcacccgcatgagcgccagcggc
ggcagaagctctggaggtcggctggcgctcaacaaagagtacttggagacagcgagcaaa
ccgcttttgggctttagctcggacgagtcggatgcagaggtgaaccagaagggcgacctg
aacagcacatctagtcgaagaagagatcggtcgtcagggcagcatcactaccaccattac
tactacgagcagcttaggccggcgttccccagcaacagaaaccaaaggctggacgtgagt
agcgatccaaactttgataatttagaagggaagaagagcagggaagggagcccattctgg
ttgggaaagagaaaatgcactacggacttattttacagtacggagcctttagtcaacggt
gagatcaacgaggaagatgagcgagagcaacgaaacggccgtgggctcaatagcagtcgg
ttcgtgtacagttgcagcaagccgcaggaggaatactccgactcggaggaggatagggat
gaagaggatgacatgcagaagcagcaccacccccgtagtcgccgtctgagtcccagacgg
agcctgactccttccgagctgtctgctcataaaagtgccagggggttggagaactgccag
gaaagaacaggaggcggcgtgagcgcaatgcgcgacaagtatcctgaaaggagtctagac
gaggtggagagtatagactggcgggggtccgctataggcagtattagtgagagtgccagt
cgccgccccccctactcggagagaaaagctgacttgccgtcgaacgtaatgctgagcagt
ccgactcttgacagtaaccatgtggatcttggaagttactcttcattcacaaagcccaga
gtgtccatatacaatagtttcagcggcgccaccactacgaccaccagcagcagttgcggt
aatgcttcagttcgcactaatcactcgaatcataccatctccaaccacgtaacgtgtaaa
gtcccccagagcaagaaactgactgagccggaagaggagctcctgcagcagtttaaaggg
gaagaggtgtccgccaccagtggggtcagcgcccactacctgtcaatgttccttttaact
gccgcttgcctttttttcgtcttgttgggtcttctgtacctaaggatgagaggctctgga
agcgtcgaaacggccgtggcaattaagagtcatccttttggaagtgattttgacagatca
tatggggataaagaaaaatctgcaatattaaacattttgcttcacctccatgatcattta
gcaaagattgcaggtgaacatgactgtggagatcatttatatagcgggagcagaaatctg
acctttaaggaggcttctgattttttatctgttcagaatatttcttctgaagaaaacctt
tctgctgctctggagtggattattaaaagtggagaaagtgcagcaggaataaggttgatt
gggagaacccaggatgaagacgtaaaagttgtttctgacattaaatatctggaatctaca
catcctaatatgtcttttatatgtcgcttccgacgtgcatttgttgttgtaattcacaga
atgctgctttttgtcttgggcattggaattgttttgtgtattttgtggtacatgaaatac
cgatggaaaaaggaggctgaagaaaccaaacagatgtatgacatggtgggaaaaataata
gatgtgctaagaagtcaccatgaagcatgccaggaaaataaagatttgcagccttacttg
cctattccgcatgttcgagattcccttattaaacctcaagacagaaagaagatgaaaaag
gtctgggatagagctgtacattttctttctacaaatgaatctcgtatgagaacacaaaca
gaaagaataggtggtgctgacttcctagtctggaaatggattcagccatctttagcttgt
gacaaaataccatctaaagtttggcaaggaaaagcctttccactggacaagagaaattcc
ccacctaacagtttaacaccttgtttaaagatacggaacatgtttgatcctgttatggaa
gttggagaaacatgggatttggctattcatgaagctatactggaaaaatgcagtgataat
gatggcattgttcatattgctgtggataagaattctcgagagggctgtgtatatgttaaa
tgtttgtcagctgaacatgctggaaaagcttttaaagcattacatggttcctggtttgat
ggaaaattagtaacagtaaagtatcttcgactagatcgatatcatcaacgttttccccaa
gctttaaactgcagcactcctcttaaaccatcagacaactttctgaacactgtctcacac
ttgcgtcacaggaccagcacaatcaactctgtggcaaagtcatga
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