KEGG   Polypterus senegalus (gray bichir): 120540340
Entry
120540340         CDS       T08668                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:psex03037]
    120540340 (ift122)
Cilium and associated proteins [BR:psex03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   120540340 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 TPR_GEMI5 TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd Beta-prop_EML TPR_IF140-IFT172 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WDR90_beta-prop_4th eIF2A Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_WDR75_1st TPR_COPA_B Beta-prop_SPT8 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 120540340
NCBI-ProteinID: XP_039626944
LinkDB
Position
12:complement(44382995..44462464)
AA seq 1188 aa
MRAILTWMDKVHDRDKVEQCVYDLAFKPDGTQLIVAAGIRVMVYDTSDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVAYNPITHQLASCSSG
DFGLWSPEQKSVSKNKVNSKITCCGWTNDGQYLALGMFNGIVSIRNKNGEEKVKIERPGG
SLSPIWSIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDRSLNFDPCCVSFFSKGE
YIVMGGSDKQVSLYTKDGIRLGPIGEQNSWVWSCKVKPESNYVVVGCQDGTIALYQLIFS
TIHGLYKDRYAYRGSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYE
LYSDDSTDMHYRVKEKICKKFECSLLVVCSQHIILCHEKRLQCLSFNSVKEREWLMESLI
RYIKVIGGPPGREGLLVGLKNGAILKIFVDNPFAITLLKQVTSVRCLDMSASRNKLAVVD
EHNTCLVYDIRTKELLFQEPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLQGF
VVGYNGSKIFCLHVYSMSAVEVPQSAPMYQYLEKKMFKEAYQIACLGVTDNDWRDLAMEA
LEGQDFETAKKAFIRVRDLRYLELINSIEERKKRGETNNDLFLADVFAYQGKFHEAAKLY
KKTGNDSCALNMYTDLRMFEYAKDFLGSGDPKDTKMLITKQADWAKNINEPKSAAAMYLS
AGEHMKAIEIIGDHGWVDMLIDLARKLDKAEREPLSRCAFFFKKLEHHGYAAETYMKMGD
LKSLVVLHVDTHHWDEAFELVEKHPEFKDYVYVPYAQWLAENDRFEEAQKAFHKAGRQNE
AVKVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIARENEEKKAEMLEKFQKFQHLAELY
HVYHSIQRYTDEPFSSHLPETLFNISRYLLHNLTKNTPLGIYKVNTLYALAKQSKALGAY
KLARHAYEKLQGLRIPARFQETIELGSLTLRSKPFHDSEELIPMCYRCSTNNPLLNNQGN
VCINCRQPFIFSASSYEVLPLVEFYLEEGITDEEAVALIDLEAPRAEKSNTNWQEITQAD
SQTLRLDDSEDNAEEDPFTAKLSFEQGGSEFVPVVVNRSVLRSMSRRDVLIKRWPKPLKW
QYYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgagggctatactcacatggatggataaagtgcatgacagagataaagtggagcaatgt
gtctatgatctagcattcaagcctgatggaacacagcttattgttgctgcaggaatccga
gttatggtttatgacacatcagatggaactctgattcagcctctgaagggtcacaaggac
acagtgtattgtgtagcttatgctaaagatggcaagcgttttgcctctggatcagctgat
aaaagtgtcattatctggacctcaaagctggaagggattttaaagtatacgcataatgat
tctattcagtgtgttgcatataatccaattacacaccagctggcttcatgttcatctggt
gactttggtttatggtcaccagaacaaaagtctgtttctaagaacaaggtcaacagtaaa
atcacttgctgtggatggacaaatgatggtcagtatctcgcactaggaatgttcaatggc
attgtgagtattaggaataaaaatggagaggagaaagtgaaaattgaacgcccgggaggt
tctttgtcacctatctggtctatagcttggaacccttctaaagatgaacataatgatatt
ttagctgtggcagactggggacaaaaactctctttctaccagcttagtggaaaacagatt
ggaaaagaccggtctttaaactttgacccttgctgtgtcagctttttttcaaaaggagag
tatattgttatgggagggtcagataagcaggtttctttgtatacaaaagatggtatacgc
cttggtcccattggtgaacagaattcatgggtttggtcttgtaaagtaaaaccagaatcc
aactatgtggtggttggctgccaggatggaacaattgcactgtaccagctgatcttcagt
actattcatggtctttataaggacagatacgcttacaggggcagcatgacagatgttatt
gttcagcaccttattacagagcagaaagtgaggattaaatgtagagagctcgttaagaaa
attgccatttacaaaaacagattggcaatccaactaccagagaaaattctgatttatgaa
ctctactccgatgactccacagatatgcattatcgtgtaaaagagaaaatctgcaaaaaa
tttgagtgcagcctgttggttgtttgttcacaacatatcattttatgccatgaaaaaagg
ctccagtgtttgtcatttaacagtgttaaagagagagaatggcttatggagtccttaatc
cgttacataaaagtcattggtggtccaccaggaagagaaggtcttttggtaggcctaaaa
aatggagccattctaaaaatatttgtcgacaatccgtttgccatcacactgctgaaacag
gtgacgtctgtgcgctgcctggacatgagtgcatctcggaataaattagccgtagttgat
gagcataacacatgcctcgtctatgatattcgcacaaaggagctgctcttccaggaacca
aatgctaatagtgtggcctggaatactcaatgtgaggacatgctgtgcttctcaggcagt
ggctatctgaacatcaaagccagcaattttccagttcaccagcagaaactgcaaggtttt
gtggtgggctacaatggttccaagattttttgtttacatgtctattccatgtctgcagtt
gaagttcctcagtctgcccctatgtaccagtacctggagaagaaaatgtttaaagaagcc
taccagattgcttgtttgggagtaactgacaatgactggcgagatctggcaatggaagct
ctggaaggacaggattttgaaactgcaaaaaaagcatttattagagttcgtgatctaagg
tacctggagctcataaacagcattgaggagaggaaaaaacggggagagactaacaacgat
ctatttctggcagatgtttttgcctaccaggggaagttccatgaagccgctaaattgtac
aaaaagacaggaaatgacagttgcgctctcaatatgtacacagacctgcgcatgtttgaa
tatgccaaggatttccttggctcaggagacccaaaggatacaaagatgttgattaccaaa
caggcagactgggccaagaatatcaatgagccaaaatcagcagcagcaatgtacctctca
gcaggggagcatatgaaggccatagaaatcataggagatcatggatgggtggatatgttg
attgatttagctcggaaacttgacaaagccgagcgggagcctctatcaaggtgtgcattc
ttctttaagaaactggaacaccatggatatgcagctgaaacctatatgaaaatgggggac
cttaaatctctggttgttctgcatgtggacacacaccattgggatgaggcttttgaacta
gtagagaagcatccagagtttaaagattatgtgtatgttccatatgcgcaatggctggcc
gagaatgatagatttgaggaagcacagaaagcatttcacaaagctggcagacaaaatgag
gccgtaaaggtgcttgaacaactaactcacaatgctgtagtggaaagccggtttaatgat
gctgcttactactattggatgttgtcaatgcagtgtttggatatagcacgggaaaatgaa
gaaaaaaaagcagaaatgctggagaaatttcagaagtttcaacacttggcagaactttat
catgtttaccattccatccaaagatacactgatgaaccgtttagctcacatctaccagaa
acactgtttaatatctccagatatctgcttcacaacctcaccaagaatactccacttgga
atatataaagtaaataccttgtatgcactagcaaagcagagcaaagctcttggtgcatat
aaacttgcccgacatgcttatgagaaattgcaaggccttcggatacctgcccgcttccag
gagaccattgaattgggcagcttaacattaaggtccaaacccttccatgacagtgaggaa
cttattccaatgtgttacaggtgctcaactaacaatccactactcaataaccaaggaaat
gtctgtattaactgccggcagccttttattttttctgcatcatcttatgaagtgctgcca
cttgtagaattttatttagaagaaggcataactgatgaagaggcagtggctctcatcgac
ttagaagcacctagagctgaaaaaagcaacacaaattggcaagagataacccaagctgat
agccagacgctaagacttgatgattctgaggataacgctgaagaggacccattcactgca
aaactgagctttgagcaaggaggatcagagtttgtcccagtggtggtaaaccgatcagtt
ctgcgttcaatgagtaggagagatgttctcataaaacgttggccaaaacccctaaaatgg
cagtattacaggtccttgctacctgatgtttcaattaccatgtgcccttcatgctttcag
atgtttcacagtgaagattatgaattgttggttcttcaacacaactgctgtccatattgt
cgcagaccaatagatgagcctaactga

DBGET integrated database retrieval system