Polypterus senegalus (gray bichir): 120541191
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Entry
120541191 CDS
T08668
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120541191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120541191
Membrane trafficking [BR:
psex04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120541191
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
120541191
NCBI-ProteinID:
XP_039628542
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Position
12:complement(80974290..80990302)
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AA seq
861 aa
AA seq
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MITTLRALLWLATVCLLTDSALSSTCAQNYFQCANERCVPYRWICDGTDDCGDGSDELYS
SCQLKTCSPSEFSCGGAMNQCVPREWHCDSKVDCENGADELNCPLKNCTDDEFRCRSGKC
ISVQFVCDEEKDCDDGSDEDSCPTPTCGPNMFQCNNSACIPLLWACDGDPECLDQSDEWP
QNCPGRKPSTSSHCSSLEFQCGSGECVHQKWLCDGTNDCRDHSDETNCEKPTCRPDEFQC
NDGTCIHGSRQCDREYDCKDLSDELGCVNVTLCEGPDKFQCKSGECIKMAQVCDKQRDCR
DWSDEPLKECETNECLYNNGGCSHTCNDLKVGFECLCPSGFQLADKKRCQDIDECQNPDA
CSQICINLEGGYKCECREGYHLDPVNKSCRVMGTVAYLFFTNHHEVRKITLDRSDYKRLI
PRLKNVVALDMEIPTNKIYWADLSQKKIYSTHMEKADNSSHHTTVIGNDIAAPDGIAVDW
VHRNLYWTDSDLSTISVATTDGTRRKTLFRNGLAKPRDIVVDPVNGFMYWTDWGTPAKIE
KAGLNGVDRIPLVTDTIEWPNGITLDLESKRLYWVDSKLHTISSIDVHGGNRKTVVASED
KLAHPFSLTVFEDKVFWTDVENEAIFSANRLTGEDIMVVVENVLSPQDIILYHNVKQPTG
VNWCANNNGGCEYLCLPAPQITHHSPKYTCACPDHLVLAADMRRCVPADEVPLSTSKSGG
RPATTTHSPPPRRTSVVPKTTTPSAPRSSTASQVDTTALPTHQEAITLSQHTLGGVKVSA
NLQKSSSPTALYIVLPIVILCLIGFGGVLLWRNWRLKNTNSINFDNPVYQKTTEDEIHIC
RSHDGYSYPSRQMVSLDEDVA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgataacgacactacgtgcgcttctgtggcttgcgactgtctgcttattgaccgactct
gcactttcttctacctgtgcccagaattacttccagtgtgccaacgaaagatgtgtcccc
taccgctggatctgcgacggtaccgatgactgcggcgatggctccgatgagctctactct
tcatgccaactgaagacgtgctcacccagtgaattcagctgtggcggtgctatgaaccag
tgcgtcccccgtgagtggcattgtgactcgaaggtggactgcgagaacggcgccgatgag
ctcaattgtcccctcaaaaactgcacggacgacgagttccgctgccgcagtgggaagtgc
atctcggtgcagtttgtgtgcgatgaagagaaggactgcgacgacggcagcgatgaagac
tcgtgtcccactcccacttgcggacccaacatgttccagtgcaacaattctgcgtgcatc
cccctgctttgggcctgtgatggagaccccgagtgccttgaccagtccgacgagtggcct
cagaactgcccggggcgcaaaccctccacttcatctcactgctcgtcactcgagttccag
tgcggcagcggcgagtgcgtccaccagaagtggctctgcgacggcaccaacgactgccgg
gaccactcggatgagaccaactgtgaaaagccgacatgccgcccggacgagttccagtgc
aacgacgggacctgcatacacggcagccggcagtgcgaccgggagtacgactgcaaggac
ctcagtgacgagttgggctgcgtcaacgtgacgctgtgtgaaggaccagacaagtttcag
tgcaagagcggcgagtgtataaagatggcccaggtgtgtgacaagcagagggactgtagg
gactggtcagacgagcccctcaaagaatgtgaaaccaacgagtgcctgtacaacaatggc
ggctgctctcacacttgcaatgacctcaaagttgggttcgagtgcctgtgcccttctggc
ttccagctggccgataagaaacgctgccaagatatcgatgagtgccaaaacccagacgcc
tgtagccagatctgcatcaacctggaggggggctacaagtgcgagtgccgggagggctac
cacctggaccccgtgaacaagtcgtgcagagtgatgggcacggtggcctatttgtttttt
acaaatcaccacgaagtgcgcaaaatcacactggaccgcagcgactacaagcgcctcatt
cctcgcctcaagaacgtggtagccttggacatggagatcccgaccaacaagatctactgg
gccgacctttcccagaagaagatctacagcacacacatggagaaggcggacaactcgtcc
caccacaccactgtcattgggaacgacattgccgctcctgatggcattgcagtcgactgg
gtccacaggaacctctactggacggactcggatttaagcaccatctccgtggcgacgact
gacggcactcgccggaaaacgctcttcagaaacgggctggccaagcccagggatatcgtg
gtggaccccgtcaacgggttcatgtactggacggactgggggacccctgccaagattgag
aaggccgggctcaacggcgtggatcgcattcctctggtgacggacacaatcgagtggcct
aatgggatcacgctagatctggagagcaagcggctctactgggtcgactccaagctgcac
accatctccagcattgacgtccacggcggaaacaggaagaccgtggtggcgagtgaagac
aagctggcccaccccttctccctaaccgtctttgaggacaaggtcttctggacggatgtt
gaaaacgaagcgattttcagtgctaaccgactgacaggagaggacatcatggtggtggtc
gagaatgtgttgtccccccaagacatcatcctctaccacaacgtcaagcagcccactgga
gtgaactggtgtgcaaacaacaatggaggctgcgagtacctgtgccttcctgccccccag
attactcaccactcgcctaaatacacctgcgcttgccccgatcacctggttctggctgcc
gacatgaggcgatgcgtgccagctgatgaagtgccacttagtacgtcaaagtcaggtggg
cggcccgccaccaccacacacagtccacccccgaggagaacttcagttgtgccaaagacc
actacgccgtcagcaccccgtagcagcacagcatcccaggtggacacgacggctctgcca
acacaccaagaagccatcactctgtcccagcacacactcggtggtgtcaaagtaagcgcc
aacctccagaagagttcctcgccgacggccctctacattgtgcttcccatcgtcatcctg
tgcctcattgggttcggcggcgtcctgctgtggcgaaactggcgcttgaagaacaccaac
agcatcaacttcgacaacccggtgtaccaaaaaacgaccgaagacgagatccacatctgc
aggagtcacgatggctactcgtacccctcgcggcagatggtgagcctcgatgaagatgtg
gcttga
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