Polypterus senegalus (gray bichir): 120541481
Help
Entry
120541481 CDS
T08668
Symbol
si:ch73-22o12.1
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03266
Virion - Herpesvirus
psex04514
Cell adhesion molecules
psex04520
Adherens junction
psex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120541481 (si:ch73-22o12.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120541481 (si:ch73-22o12.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120541481 (si:ch73-22o12.1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120541481 (si:ch73-22o12.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120541481 (si:ch73-22o12.1)
04090 CD molecules [BR:
psex04090
]
120541481 (si:ch73-22o12.1)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
Nectin family
120541481 (si:ch73-22o12.1)
CD molecules [BR:
psex04090
]
Proteins
120541481 (si:ch73-22o12.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
ig
Ig_3
I-set
Ig_2
C1-set
TM_ErbB1
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
120541481
NCBI-ProteinID:
XP_039629098
LinkDB
All DBs
Position
12:106789579..106849411
Genome browser
AA seq
503 aa
AA seq
DB search
MVMARRASPSLPAAALLLLLMQAVSGQRVKVIPEVTAYPGDEVSLRCSFVDPNGEVKKSQ
VTWIRDIYHEKKQNIAVYNPMFGESYPESSIKGRVSFRTSSLDDPTIVINPVKLEDEGSY
ICEYATYPSGNEEGVTKLYVLAKPVNYGDAIQVQEGPKSVPVARCVSSSGKPPAEISWIS
SFPGNVTTENQTNANGTVTVISTFSLVPSGLIHDYVVTCQVHHKTLVTPEKFNIKLNVNH
SPVVSISGYDDNWYLGREGASLVCQSRANPPATSVTWKAANGKIPDSVQVNGDVLQVKKV
DPSVNTTFICEVTNSVGVSQRELSVFVRESPPERQVDNAGVVAGAVIGSLLAIFVVGGVL
AALFMCRRRQRNYREDHGTYDTKTRVFGAKNNGTGAGALSYKYCESSSEANTEKSSNNFH
VPPLNYGVGVAPTAQDILLGQELDDVEKSKFSMLEYDENYDHFDENVNENRPVLQIQDHD
CYLDDDMESQRDGSVISRTAVYV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggctaggcgagctagcccgagtttaccggcagcagcgctacttctcctgttg
atgcaagctgtcagtggtcagagggttaaagtgattcctgaggtcacagcctaccctgga
gatgaagtgagtcttcgctgcagctttgtagatcccaatggagaggtgaagaagagccag
gtgacttggatccgtgatatttatcatgagaagaaacagaacattgccgtttacaacccc
atgtttggtgagagctatcctgagtcgtctataaaggggcgtgtctccttcaggacgtca
tcgctggacgatcccaccattgtcattaatcctgtgaagctggaggatgaaggcagctat
atctgtgaatatgccacctaccccagtggcaacgaggagggcgtcaccaaactatacgtg
ctggccaagccagtcaactatggagatgcgatccaggtacaggaaggtccaaagtcggtt
cccgtggcccgatgcgtgtcctccagtggcaaacctccagctgagatctcctggatatct
agttttccaggcaacgtcaccactgaaaatcaaacaaatgcaaatggaacggtcacagtg
atcagcactttcagcctggtgcccagtggattgatccacgactacgtcgtcacttgtcaa
gtccaccacaagacgcttgtcacaccagagaagtttaatataaagctgaatgtgaatcac
tctcctgtagtgtccatctctggctatgatgacaactggtatctaggacgagaaggggcc
tccttggtctgtcaatccagagccaacccaccagcaacgtctgtaacctggaaagctgcc
aatgggaagataccagactctgttcaggtgaatggtgatgttcttcaggtgaagaaggta
gacccatctgttaacaccacgtttatctgcgaggtcaccaacagcgtgggtgtcagtcag
cgggagctctccgtctttgtccgagagagtccgccagagagacaagttgataatgctggt
gtggtagctggagccgtgattggcagtctactggccatctttgtggtgggtggagttttg
gccgcgctgttcatgtgccgtcggcgacagaggaactacagagaagatcatggtacctac
gacacgaaaactagagtgtttggggcaaaaaataatggaactggagcaggtgcactcagc
tacaagtactgtgagagctcctctgaagcgaacactgaaaaatccagcaacaattttcac
gtaccacccctcaactatggtgtcggtgttgctccaaccgcgcaggacatcttgctcggc
caagagctggacgacgtggagaaatctaaatttagtatgcttgagtatgacgaaaactac
gaccactttgacgagaatgtgaatgagaaccggcctgtgctgcagatccaggaccatgac
tgctatttagatgatgacatggagtctcaaagggatggttcggtcatttctaggactgct
gtttatgtgtaa
DBGET
integrated database retrieval system
