Polypterus senegalus (gray bichir): 120541630
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Entry
120541630 CDS
T08668
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K09290
tropomyosin 3
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04260
Cardiac muscle contraction
psex04261
Adrenergic signaling in cardiomyocytes
psex04814
Motor proteins
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120541630 (tpm1)
04820 Cytoskeleton in muscle cells
120541630 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120541630 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
120541630 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120541630 (tpm1)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
120541630 (tpm1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
DUF745
TMF_DNA_bd
Lebercilin
DUF3450
CENP-F_leu_zip
ATG16
Laminin_I
PUMA_CC
DUF1664
SlyX
DUF16
Motif
Other DBs
NCBI-GeneID:
120541630
NCBI-ProteinID:
XP_039629368
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All DBs
Position
12:complement(131001535..131025560)
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVALQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggaaaatgccttggac
agagctgagcaagctgaagcagacaagaaggcagccgaggacaggagcaagcagctcgaa
gacgagctggtagctctgcagaagaagctgaaggccacagaagatgaactggacaaatac
tctgaggccttgaaagatgcccaggagaaactggaattggctgaaaagaaggccactgat
gctgagggtgatgtagcttcactgaacaggcgcatccagctggttgaggaggagttggat
cgcgctcaggaacgtctggccacagccctgcagaaactggaggaggcagagaaggctgct
gatgaaagtgaaagaggcatgaaggtcattgagaacagggccttgaaggatgaggagaaa
atggaactgcaggagattcagcttaaagaggccaagcacatcgctgaagaggctgaccga
aaatatgaagaggtagcacgtaagcttgtgatcattgagggtgatcttgagcgtactgaa
gaacgtgctgaactttcagaaagcaaatgtgctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcacaggctgagaaatactcacagaaggaagacaaa
tatgaagaagagatcaaggtactcacagacaaactcaaagaggctgagacccgtgctgaa
ttcgctgagaggacagtggccaagcttgagaagtccattgatgacttagaagatgagttg
tatgctcagaaactcaagtacaaagcaatcagcgaggagctggaccacgctctcaacgac
atgacttcaatgtaa
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