Polypterus senegalus (gray bichir): 120541886
Help
Entry
120541886 CDS
T08668
Symbol
trpm4a
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4a
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120541886 (trpm4a)
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120541886 (trpm4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
M3K_C
Motif
Other DBs
NCBI-GeneID:
120541886
NCBI-ProteinID:
XP_039629771
LinkDB
All DBs
Position
13:92241056..92380163
Genome browser
AA seq
1224 aa
AA seq
DB search
MRKNKEKDGGMRGPDHVEKTQSWIPKIIKKKVCNTFIEDPTSNGSLCQCGSPREKHVAVT
TEDNFSAAMVSKWDPQLHTKEEPTDAYGTLEFSGVSRKQSHFLRCSNSTDPKIIYNMLTG
TWNIPPPNLVVSVMGGSDKMKAWMIDVLRQGLVRAAQSTGAWIITKGIRTGIGRYVGEAV
RDHATARTQSSNKVVALGVVPWGMVHNNHLLVNAKGSFPAKYNAMQKPPGRHSLDSNYSA
FLLLDDGTVGKSGCESQFLTRLEKHISHQRTGVWGKGSIDIPVLCMLITGEPKMLERVEQ
SVKNSIPWMIVARSGGVADFLCDIYDEAVTQEGLADVLEDKVKKHFPGQNMANFTELAQN
IMQHKDLLTIYDVHQDGTEDFDTLILKSLVKACKKQETNAIEYIDELKLAVAWNRVDIAR
SELFKSVVHWKFTDLEDPMTDALVNDKPDFVKLFIENGLSVFEYLTYKRLEELYCSVPEH
SLIYHLLMRKHSERKEILFTKEGPIPPEEMEKGKNITLYEVSKVLHDLLGGVCHPMYSDD
VLMGTTDSAKRPVTNVSNAFHKNSDKYHLHVIHPWTSLFIWAVLQNRREMAAYFWEMAGD
SVVSALAACKILKEMSRLENETETKVSMKELSARFEQLAHDMFSECYRSSESRAFTLLIR
QSPTWGKATALLLATEADARHFFSQDGVQSLLTQIWWGDIHQGTAIWKLIIHLFIPPLVY
TSLIKYRNTDEETKEEEQHKLELESFEGDTVLSLNDILSNDSDTEEMEALKGNHKDVSSH
GVKPQPQRPFYVTRWKKFWNAPVTAFLGNVIMYFTFLFLFSYVLLLDFQPPPPSGPSNSE
IVLYIWVATLVCEEVRQSFFVGNLSIKQKLKYYFEDIWNKCDVTAISLFIIGLICRMFPF
SYDLGRTFLCLDFMIFTLRLIHIFAVHKQLGPKIIIVGKMMKDVFFFLFFLGVWLLAYGV
TTQGLLHPNDSRVDWIFRRVFYRPYLHIFGQIPLDEIDASHISIQNCTNDPVEIMMGDFP
PCTNTYANWVVILLLVIYLLVTNILLLNLLIAMFSYTFSTVQGCSDIHWKFQRYNLIVEY
HNRPALPPPFIIFSHIHLFIKRCIRKIESIKKRHFMVELEKRQDSRLMTWEAVQKENFLV
QQNKLKRESDSERLKRTSAKVENILKSMADIRDHDHRLKVLESEIEYCTSALSWLVESFA
QNNANQLSRPPPVLKDHGSIRKND
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaataaagagaaagacggtggaatgaggggacctgaccatgtggaaaagacc
cagagctggattccaaaaataataaagaaaaaagtgtgcaatactttcatagaggacccc
acaagcaatggtagcctgtgccaatgtggaagtccccgggaaaagcatgttgcagttaca
acggaagacaacttttcagctgcaatggtcagtaagtgggacccacagttacataccaaa
gaggagccaactgatgcatatggaacgctggagttttctggagtcagcagaaagcaaagc
catttcttgcgctgttcaaacagcactgatcctaaaatcatctacaacatgctaactggc
acctggaacattccccctcccaatcttgtagtgtcagtaatgggtggcagtgataaaatg
aaggcctggatgattgatgtgctgaggcaagggttggtgagagcagcccagagtacaggt
gcatggatcataacaaagggcatacgaactggcatcgggcgctatgttggagaggcagtt
agagatcatgccacagctagaacccagtccagtaacaaagtcgttgcactgggtgtagtg
ccatggggaatggtccacaataaccatttacttgtcaatgccaagggatcatttccagca
aagtacaatgccatgcaaaaacctcctggccgacactctctggacagcaactactcagcc
ttcttgcttttggatgatggcactgtgggcaaaagcggttgtgagtcacagtttctaacg
cgactggaaaagcacatttcccaccaaagaacaggagtgtgggggaaaggtagcattgac
atcccagtattgtgcatgttgatcaccggggagccaaaaatgctggagagagtagaacag
tcagtgaagaactccatcccttggatgattgtcgctcggtcaggtggagtggcagatttc
ctgtgtgatatctatgatgaggccgtgacacaagaagggctggcagatgtgttggaagat
aaagtgaagaaacattttcctggacagaatatggccaacttcactgagctggcacagaat
atcatgcagcataaagacttgctcactatatatgatgttcaccaagatggcacagaagac
tttgacactcttatcctcaagtctctggtaaaagcatgcaaaaagcaagaaaccaatgca
atagagtacattgatgagctaaagctggcggtagcctggaatcgggtggatattgccagg
agtgagctgttcaaaagtgttgtgcattggaagtttacagacctagaggatccaatgact
gatgccttagtgaatgataagccggattttgtgaagcttttcatagagaatggccttagc
gtgttcgagtatctcacttacaagaggttggaggagctctactgttctgttcctgaacat
tccttaatttatcacctgcttatgcgtaaacacagtgagcgtaaggagattcttttcaca
aaggaagggcctattcctccagaggaaatggagaaagggaaaaacatcactctgtatgaa
gtgtccaaagttcttcacgatttactgggtggagtgtgtcaccctatgtattcagatgat
gtattgatgggcacaacagattcagctaaaagaccagtcacaaatgtgagcaatgctttc
cacaaaaacagtgacaagtaccaccttcatgtaattcacccatggacaagtcttttcatc
tgggctgtgcttcagaacaggagggaaatggcagcttacttctgggaaatggctggagat
tcagtagtctcagctcttgctgcctgtaaaatcctcaaggaaatgtctcgtttggaaaat
gagactgaaactaaagtatccatgaaggaactgtctgccagattcgagcagctggcacat
gacatgttcagcgagtgttatcggagtagcgaaagccgtgcattcaccttactcatcagg
cagtctccaacatggggaaaagctactgctttgcttcttgccactgaggctgatgccagg
cacttcttcagccaagatggcgttcagtctctccttacacaaatctggtggggtgatatc
catcaaggcacagcaatctggaaactaattattcatctttttattccaccgctagtatac
acctcgctcatcaaatacagaaacacagacgaagagacaaaggaagaggaacaacataaa
cttgagttggaaagctttgaaggagatactgttctctctcttaatgacattttgagcaat
gactctgatacagaagaaatggaggcactgaaaggaaatcataaagatgtttcatcacat
ggtgtaaagccacaaccccaacgtcctttctatgtgactcgatggaagaagttctggaat
gcaccagttacagcttttcttggaaatgtcatcatgtacttcactttcctgttcctcttt
tcatatgttctgcttctggattttcaaccccctcccccaagtggaccatcaaattctgag
attgtcctctacatctgggtagccacactggtgtgtgaagaagttcgacagagttttttt
gtaggcaatttgagcataaagcagaaactgaagtactattttgaggatatctggaacaaa
tgtgatgtgactgcaatctctctgttcatcattgggctaatctgtagaatgttcccattt
tcttatgaccttggccgaaccttcctctgccttgattttatgatcttcactctccgactc
attcacatctttgctgttcataagcaactaggaccaaaaataatcattgttgggaaaatg
atgaaggatgtgtttttcttcctgttctttctgggtgtgtggctgcttgcatatggtgtg
acgacacaaggccttctgcatcccaatgattctagggtagactggatttttagaagggtc
ttctacaggccataccttcatatctttggtcagataccccttgatgagattgatgcttct
cacataagtatacagaactgtacaaatgatcctgttgaaatcatgatgggcgattttcct
ccctgcaccaacacatatgctaactgggttgtcattttgctgctggtcatatacctgctc
gtcacaaacatcttgttgttgaacctgcttattgcaatgttcagctacacattctcaact
gtgcagggctgcagtgatatccactggaagtttcagcgatataacctgattgttgagtat
cacaaccgcccagctcttcctccacctttcatcatctttagtcacatccatctcttcatc
aagaggtgcattcgcaaaatagagtctatcaagaaaaggcatttcatggtggaactggag
aaacgtcaagacagccggctaatgacttgggaagcagttcagaaggaaaactttcttgtt
caacaaaacaagttgaagagagaaagcgatagtgagcgcctcaaacgaacatctgccaag
gttgaaaacattttaaaaagtatggcagatatcagggaccacgaccataggcttaaagtc
ctggaaagcgagatcgagtattgcaccagtgcactctcatggctggtggagtcttttgcg
caaaacaatgcaaaccagctcagcagacctccaccagttcttaaggaccatggatctatc
aggaaaaatgactaa
DBGET
integrated database retrieval system
