Polypterus senegalus (gray bichir): 120541999 Help Entry 120541999         CDS       T08668                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism psex  Polypterus senegalus (gray bichir) Pathway psex04010   MAPK signaling pathway psex04137   Mitophagy - animal psex04141   Protein processing in endoplasmic reticulum psex04210   Apoptosis psex04217   Necroptosis psex04621   NOD-like receptor signaling pathway psex04622   RIG-I-like receptor signaling pathway psex04920   Adipocytokine signaling pathway psex05132   Salmonella infection psex05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:psex00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     120541999 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     120541999 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     120541999 (traf2b)   09143 Cell growth and death    04210 Apoptosis     120541999 (traf2b)    04217 Necroptosis     120541999 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     120541999 (traf2b)    04622 RIG-I-like receptor signaling pathway     120541999 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     120541999 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     120541999 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     120541999 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:psex03019]     120541999 (traf2b)    04121 Ubiquitin system [BR:psex04121]     120541999 (traf2b) Enzymes [BR:psex01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      120541999 (traf2b) Messenger RNA biogenesis [BR:psex03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      120541999 (traf2b) Ubiquitin system [BR:psex04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     120541999 (traf2b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_6 zf-RING_4 zf-C3HC4_2 zf-C3HC4_5 Motif Other DBs NCBI-GeneID:  120541999 NCBI-ProteinID:  XP_039630002 LinkDB All DBs Position 13:complement(1747285..1766459) Genome browser AA seq 546 aa AA seqDB search MARSSSLPSSLDSTLPGFSLTILGAELEQKYLCRQCKLILRRPYQAGCGHRFCAFCFKQI ISSGPQHCLACADEGVVEDLLDTNSAFPDNAARREIENLPAVCSNPGCVWKGSIREYEAS HEGQCEFQRIECDACKQTIRSCDKERHMERECPERSLHCRYCKTIFNFKDIKAHDEICLK YPMHCEGCGKKKIPREKFYDHAKSCGKYKSPCHFKGVGCPVIVENEKLSEHEIQGSREHM RLLLAAVESLKFLNEEKTVSNLLAPRSKPRGLDFCVQNLGECLMGGGLYCDPDEGFASNI LPSVDKPYNGHQRRYDDLAQKLATFENIVCVLNREVEKNSLTLEAYSRQRGLDQEKIDYL TSKVRQMERSVSLKDLAIAEMEQKLQENEHSTHDGVFIWKIHDFSRKRQEAVAGRMPAIF SPVFYTSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMKGKWDALLKWPFNQKVTLMLLDQ NNREHIIDAFRPDITSSSFQRPISEMNIASGCPLFCPLHKLDSKSSSAYLQEDTIFIKAI VDLTGL NT seq 1641 nt NT seq  +upstreamnt  +downstreamnt atggccagatcctcctctcttcccagttcactggactccactttgccggggttctcccta acgatcctgggtgcagaacttgagcagaaatacctgtgccgtcagtgtaaactgatcctc cgcagaccctaccaagctggttgtggccatcgcttctgtgctttctgcttcaagcaaatc atcagctcaggacctcagcattgcctggcatgtgctgatgaaggtgtggtagaagatctc ttggacacaaattcggcttttccagacaatgctgccaggagggaaatcgagaacctgcca gccgtgtgtagcaatcctggctgtgtctggaaagggagcattcgagaatatgaggccagc catgaagggcagtgcgagttccagcgcattgagtgtgacgcctgtaagcaaacgatcagg agctgtgataaggagcggcacatggagcgagagtgtccggagaggagcctccactgccgc tactgcaagaccatcttcaacttcaaagacataaaggctcatgacgagatctgcctgaag taccccatgcactgtgaaggctgtggaaagaaaaagattccaagagagaagttctatgat catgcaaagtcctgcggcaaatacaagtccccttgccacttcaaaggagtcggatgccca gtgattgtggagaacgagaagttgtcagaacatgagatccaaggcagccgggagcacatg aggctcctcttagctgcagtcgaaagcctcaagtttctgaatgaggagaagaccgtatcc aacttgctggccccacgttcgaaaccacgtggactggacttctgcgtgcagaacctggga gaatgcttgatgggtggaggtctgtactgtgatcctgatgaaggctttgcctccaatatt cttccttctgtcgacaaaccgtacaacgggcaccagagaaggtatgacgatctcgcacag aagctcgccacttttgagaacatcgtctgtgtcctcaaccgtgaggtggaaaagaattcg ctcactctcgaggcatacagcaggcagcgtggacttgaccaggagaagatcgactacctc accagcaaggtacggcaaatggagcgctcggtgtctctcaaagacttggctatcgccgag atggagcagaaactccaggaaaacgagcacagcacccacgatggcgttttcatttggaaa attcatgacttttcccgtaaaagacaggaagcggttgctgggcgcatgccggctatcttc tctccagttttctacaccagcaagtacgggtacaagatgtgtctgcgactctacctgaac ggggacggcacgggacgcggcactcacctgtctctgttctttgttgtgatgaaaggaaaa tgggacgccttgctgaagtggcccttcaatcagaaggtaaccttgatgctgttagaccag aacaaccgagagcacatcatcgacgcctttcggcctgacatcacctcttcatcgttccag aggcccatcagcgagatgaatatcgccagtggctgcccgctcttctgccccttacacaaa ctggactccaagagctccagtgcctacctgcaagaggataccattttcataaaggccatc gtagatctgacggggctgtga

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